KEGG   Oryza sativa japonica (Japanese rice): 4351012
Entry
4351012           CDS       T01015                                 
Name
(RefSeq) nuclear pore complex protein NUP107
  KO
K14301  nuclear pore complex protein Nup107
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4351012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4351012
   03036 Chromosome and associated proteins [BR:osa03036]
    4351012
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4351012
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    4351012
SSDB
Motif
Pfam: Nup84_Nup100
Other DBs
NCBI-GeneID: 4351012
NCBI-ProteinID: XP_015617391
UniProt: Q2R0I9 A0A8J8Y254
LinkDB
Position
11:join(27480669..27480763,27481515..27481873,27482422..27482491,27482787..27482902,27483031..27483062,27483173..27483298,27483435..27483593,27483942..27484034,27484125..27484292,27484444..27484542,27484659..27484876,27484956..27485013,27485477..27485565,27485646..27485777,27486056..27486178,27486624..27486722,27486830..27487021,27487183..27487354,27487472..27487628,27487760..27487962,27488161..27488302,27488380..27488540,27488641..27488757,27488844..27488930)
AA seq 1088 aa
MEVDPPPPPPPPMANYFDPESSGRREEYRRYRKRLSSSNASPLLGTAVSKFSEARLFCDG
NSIQRRPNAGLLLEDIKQEAADISDFDSLDESKLFGSGKKRASLDASDAGFSSGRQAVRS
ALKSVKLEEDMPHEGETTSTIFASLLDSAIQGLMPFSDVILQFERTCRNASESIRSAGTG
KLRMVEDRLMQQKAQLLLDEAASWSLLWYLYGKGNEELPGELFVAPTTSHQEACRFVVTD
LTAQLCLRIVLWLEGLASEALDLEKKVRGSHVGSYLPSSGVWHRTQRYIKRKNNDTTIVK
HVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASELCRSAGQSWRAATLCPF
GGIDLFPSLEAMLKNGKSRTLQAIELESGVGRQLCLWKWASYCASEKIAEQDGGRYEMAV
YALQCSNLKRILPICTDWESACWAMTKSWLGVQVDLVLSQYQTSRPEEKQFDDEMNGTQP
MLNSAGPESWPHSVLDQQPRDISALLQKLHSSDLVHETVSRACREQHRQIEMNLMSGNIA
HLLDLLWSWVSPSEDDQNILRPRDDPDMIRFGAHIVLVLRYLFSDEMEDEFEEKLVAVGD
LIINMYVRYLFSEQQEELVGVYASQLERDLCIELFVEMMELRLNSSLHTMFKLFLSAVEY
LPFSSGDASKASLEEIIERVLSRSREPKPIKYDEDIFDVAEMHHLQALQKATVIQWLCFT
PPSSIPDFQMISGKLLIRALMHSNTLFREFSLISMRRVPELPVGPHKLLAILAEPLKQKE
NLISLEDPEVSDNLREFEDWHEYYSLDATYRSWLKFEMENASISPEMLSAEEKSQAVAAA
KETLELAFLLLYREDIPWLNAVESSPIEPSEHVFLELHATAILCLPSGECMLPDATSCTA
LTSALYSTVSETEVLHRQLKVDVNVSSKDPCCIQVSLLCLAVEGDGLGLHEANDGGLLAA
IMAAGFKGELNRFQPGVSIEISRLDAWYSDGHGSVESTAAYIIRGLCRRCCLPETILRSM
QASIALSEAGDSLDHCDKLIELVASSESGIMHLFSQQQLQEFLLFERECYLSKMELEEEQ
LEQLPADG
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggaggtggacccgccgccgcctccgccgccgccgatggcgaactacttcgacccggag
tcgtccggccgccgggaggagtaccgccgctacagaaagagattatcttcttcaaatgcc
tctccactgttgggtactgcggtctccaaattttcagaagcaaggctgttctgtgatgga
aacagcatacagaggcggcccaatgctggtctactccttgaagatatcaagcaggaggct
gctgatatttctgattttgatagcctggatgaatctaagctgtttggatcaggaaaaaaa
agggcatcattggatgcctcagatgcaggtttcagttcaggtaggcaggcagtgcggtcg
gcattgaaatcagtcaaactggaggaggatatgccacatgaaggagaaacaacttctaca
atttttgcatccctccttgattctgcaatccaaggattgatgcccttctcggatgtgatt
ttacaatttgagaggacatgtcgaaatgcttcagagtcgataaggtccgctgggacagga
aagcttcggatggtggaggatagacttatgcagcaaaaagcgcaattgttactggatgag
gctgcttcttggtcacttctttggtacctctatgggaaaggaaatgaggagcttcctgga
gagctatttgtggcaccgactacttcccatcaagaagcttgccgctttgttgtaacagac
cttacggcacagttatgtctacggattgtactttggcttgagggtcttgcttctgaagct
cttgatttggagaaaaaggtgagaggatctcatgttggttcatacctaccaagttctggt
gtttggcatcgtacacaaaggtacataaagagaaagaacaatgatactactatagtgaag
catgtggattttgatgctccaactcgtgaaggagcccaacttcttcctgatgacaagaag
caagatgaattgcttttagaggatatctggactctcttgagagcaggaaggttagaagag
gcatctgaactgtgtcggtctgctggtcagtcatggagagctgcaactctttgccccttt
ggtggcatagatttgtttccttccttggaggccatgctgaagaatggaaagtctagaaca
ctgcaagcgattgaattggaaagtggtgttggacggcagttatgtctttggaaatgggct
tcatattgtgcttcagagaaaattgctgaacaagatggtggccgatatgagatggcagta
tatgctttacaatgcagtaacttaaagcgtatcttgccgatctgtactgactgggagtca
gcttgttgggcaatgacaaaatcctggttaggtgttcaagtggatctagtattgtctcag
taccaaaccagtagaccagaagagaaacagtttgatgacgagatgaatggaacccaacct
atgttgaactcagctggcccagaaagttggccacacagtgttcttgatcagcaaccccgt
gatatatctgcgcttctgcagaaactccactcgagcgaccttgtccatgaaactgtttct
cgagcatgccgggagcagcatagacaaatcgagatgaatctcatgagtggaaatatagct
catcttcttgatcttttatggtcatgggtgtcaccgtctgaagacgaccaaaacatattg
aggccccgtgatgaccctgatatgatacgcttcggagcacatattgttcttgttctgaga
taccttttcagcgacgaaatggaagatgagtttgaggaaaagctagttgctgttggtgat
ctcatcatcaacatgtatgtgaggtacttgttttcagagcagcaagaggaattggttgga
gtatatgcttctcagcttgagcgtgacctttgcattgagttgtttgttgaaatgatggaa
ctaagattaaatagcagcttgcataccatgttcaagctcttcctgtctgctgtggagtat
ttgccattctcatctggagatgcatccaaggcttctcttgaagagatcattgagagggtt
ctttcaagatcccgcgaaccgaaacccattaagtatgacgaagatatttttgatgttgcg
gaaatgcatcacttacaagcactccagaaagcaacggtcattcagtggctttgcttcaca
ccgccatcctcgattccagattttcagatgatcagtggaaagcttctgatacgggcactg
atgcacagcaacacactattcagagagttttccctgatatcaatgaggagagttcctgag
ctaccagtaggaccacacaagttgcttgccatcctggctgaaccattgaaacaaaaagaa
aatttaatttcactcgaagatcctgaggtatctgataatttacgggagtttgaagattgg
catgaatattactccctggatgctacttaccggagttggcttaaatttgagatggagaat
gcgtctatttctcctgaaatgctttcagcagaagaaaagagtcaagctgttgctgcagcg
aaagaaacgctggagttagcattcttattattatacagggaagatattccatggttaaat
gctgtcgagagtagtccaatcgagccctcagaacatgtttttcttgagttacatgcaact
gcaatactctgcctaccttctggggagtgcatgctgccagatgcaacatcatgcacagct
ttgacaagtgcattgtactctactgttagtgaaacggaagtgttgcatcgtcaattgaag
gtggatgtgaatgtttcatctaaagatccttgctgtattcaagtttctctcctctgccta
gcagtagaaggtgatggtttggggcttcatgaagccaatgatggaggtcttcttgctgca
attatggctgctgggttcaaaggtgaactcaatcgatttcaacctggagtttcaattgaa
atatcacggcttgatgcttggtattctgatggtcatggttcagtagaaagcactgctgca
tacataattcgtgggctttgtcgtagatgctgcctgccagaaactattctacgatctatg
caggcatccatcgctctatctgaagcaggtgattctctagatcattgtgataagctcatt
gagttggttgcttcatcggaatctggaataatgcatttgttcagccaacagcagttgcag
gaattcctgctttttgagagagaatgctacctatctaaaatggagcttgaggaagagcag
ttagagcagttacctgctgatggctaa

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