Oryza sativa japonica (Japanese rice) (RefSeq): 4351059
Help
Entry
4351059 CDS
T01015
Name
(RefSeq) WD repeat-containing protein VIP3
KO
K12602
WD repeat-containing protein 61
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4351059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4351059
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
4351059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Ge1_WD40
Nup160
WD40_like
Cytochrom_D1
DUF5711
Motif
Other DBs
NCBI-GeneID:
4351059
NCBI-ProteinID:
XP_015617388
UniProt:
Q2R037
Q0IR99
LinkDB
All DBs
Position
11:26501623..26504316
Genome browser
AA seq
323 aa
AA seq
DB search
MKLAGLKSVDGAHEESIWAAAWVPAADHRPAALLLTGALDETVRLWAPDDLASAAASPSR
GHALGVVSLAAHPAGAVAAAVSLDSYVRVFDVDSGSSVATLEAPPSEVWGIQFHPKGSAL
AAAGGGSGSVKLWDTEKWKPITSLAVPRPEGARPDKTGSGKFVLSVAWSPDGKLLACGSM
DGTIAVYDAVRMKFLHHLEGHHMPVRSMVFSPVDPHVLFTASDDCHIHIYDAKEKSLIGA
MSGHASWVLSIDVSPDGMAVATGSSDRTVRLWDINTRASVQTMSNHNDQVWAVAFRPPGG
TGVRAGRLASVSDDKSITLYDYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgcggggctcaagtcggtggacggggcccacgaggagtccatctgggcggcg
gcgtgggtgcccgcggcggaccaccgccccgcggcgctgctcctgacgggcgccctcgac
gagaccgtccgcctctgggcccccgacgacctcgcctccgccgccgcctccccctcgcgg
ggccacgcgctcggggtggtgtcgctcgccgcccaccccgcgggcgccgtcgccgccgcc
gtctccctcgacagctacgtccgcgtcttcgatgtggactcgggctcctccgtcgccacg
ctcgaggcccctccctccgaggtctggggcatccagttccaccccaagggtagtgctctg
gctgcagctggtggtggcagtggatcagtgaagctctgggacacagagaagtggaagcca
attaccagccttgctgttccgcgtccagagggagctcgccctgataaaacaggaagcggc
aagtttgtcctttcagttgcatggagtcctgatggcaagctcttagcttgtggttccatg
gatggcaccatcgctgtgtatgacgcagttcgcatgaagttcctccaccaccttgagggc
catcacatgccagtgagatcaatggtgttctctccagtggacccgcacgtgctcttcact
gcctccgacgattgccacatccacatatacgacgccaaggagaagagcctcattggggcc
atgtcagggcatgcgagctgggtgctgagcatcgacgtgagcccagacggcatggcggta
gcgacaggctccagtgaccgcacggtccggctttgggacatcaacacgagggcgtcggtg
cagacgatgagcaaccacaatgatcaggtctgggctgtcgccttccgaccaccgggtggg
acaggagtccgcgcaggccggcttgccagcgtgtcagatgacaagagcatcaccctgtac
gattactcatag
DBGET
integrated database retrieval system
