Oryza sativa japonica (Japanese rice) (RefSeq): 4351098
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Entry
4351098 CDS
T01015
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4351098
Enzymes [BR:
osa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4351098
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
4351098
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
4351098
NCBI-ProteinID:
XP_015616587
UniProt:
A2ZNK3
Q2QZT4
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All DBs
Position
11:complement(27179320..27184053)
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AA seq
588 aa
AA seq
DB search
MAGYEREKKRLLDLAADSGFERDLAADCLDRIVRLYGEGGQGFITVENCGDDFLGALADA
TNNNDDWDDLNAIENEACGNLNGMMKHGVIDDKEVEVRTPLFRQAESSARQTRINLDSFG
FSSDDDFETLESHCDRSVSTQKKVNRGNNRCESSTSTSNRETLSYQQLYSLDDINFANVV
IFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLHPGVTVVVCPLLSLIE
DQIVALNFKFAIPAAFLNSQQTPSQSSAVIQELRSGKPSFKLLYVTPERMAGNSSFIGIL
IGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTATATASVCKD
ILSTLRIPNATVLKRSFDRTNLNYEVIGKTKTPQKQLGDLLKERFMNMSGIVYCLSKNEC
ADTAKFLREKYKIKCAHYHAGLAARQRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFV
IHNTMSKSIESYYQESGRAGRDNLPAHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAME
QAKKMQTYCELKTECRRQTLLGHFGEQYDRQRCKHGCSPCDNCIKIPS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtacgagagggagaagaagcggctgctcgacctggccgctgactccggcttc
gagcgcgacctcgccgccgactgcctcgacaggatcgtccgcctctacggagagggcgga
caaggttttattaccgtggagaactgtggagacgatttccttggcgcattggctgatgca
acaaacaataatgatgattgggatgatctcaatgctatagagaatgaagcttgtggcaat
ttgaatggcatgatgaagcacggtgtaattgatgataaagaagttgaggtgagaactcct
ttgttcagacaggcagaatcctctgctcgacagactcgcatcaatctggactccttcggg
ttctcctcagatgatgactttgaaacgttggagtcccattgtgatcgttcagtcagtacc
cagaagaaggtgaacagaggaaacaatagatgtgagtcatccacttcaacttcaaacaga
gaaactctaagttatcagcagctgtatagcctagatgacatcaattttgcaaacgttgtc
atctttggcaacaaaagctttaggcccctgcagtatgaggcctgtagggctgcagtaagc
aacatggacacctttgtgcttatgccaacaggtggtgggaagagcttgtgttatcagcta
cctgcaacactgcacccaggtgttacggttgttgtatgccctctactgtcacttattgag
gatcaaattgtggcattaaacttcaagtttgctataccagcagcatttttgaactctcag
cagacaccttcacagtcatctgcagtaatccaagagcttagaagtggtaaaccgtcattc
aaactcctctacgtcactcctgaaagaatggctggaaacagctcatttattgggatcctc
ataggtttacaccagaggggtttactggcgagatttgtgattgatgaagcccattgtgta
agtcaatggggacatgacttccgcccagattaccgaggcctgggatgcctcaaacagaac
ttccctcgagtaccaattatggctttaacagctacagcgactgcatctgtctgcaaggac
atactaagtaccttgaggatccctaatgcaacggtactcaagaggagctttgacagaaca
aacctgaattatgaggtgattggcaagacaaaaactccacagaagcagctgggtgatctc
ctaaaagagcgtttcatgaacatgtctggtatcgtgtactgtctgtccaaaaatgaatgt
gctgacactgccaagttcttgagggagaagtacaagataaaatgcgcacattaccacgct
ggcttggctgctcgtcaacgatccaatgtacaaggaaaatggcacagcggagaggtcaaa
gtcatttgtgcgaccatagcatttggcatgggaatagacaaacctgatgtgcgctttgtt
atccacaacaccatgtcaaaatcgatagaaagctactatcaggagtcagggagagcagga
agagacaatcttccggcacattgcattgtgttatatcagaaaaaggacctcggtcgaatt
gtatgcatgctgaggaattcagggaacttcaagagtgagagcttcaaggttgcaatggag
caagcaaagaaaatgcaaacatattgcgagctgaagacagaatgccggaggcaaactctt
cttggccacttcggtgagcagtatgacaggcaaaggtgcaaacatggttgtagcccttgc
gacaactgcataaagattccctcttga
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