Oryza sativa japonica (Japanese rice): 4351362
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Entry
4351362 CDS
T01015
Symbol
OsSCR, OsSCR2, SCR2
Name
(RefSeq) protein SCARECROW 2
KO
K27742
protein SCARECROW
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4351362 (OsSCR)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Other transcription factors
GRAS
4351362 (OsSCR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
PEX14-like_2nd
TPP_enzyme_M_2
RraB
RAI16-like
Motif
Other DBs
NCBI-GeneID:
4351362
NCBI-ProteinID:
NP_001410234
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All DBs
Position
12:join(1067853..1069393,1070506..1070947)
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AA seq
660 aa
AA seq
DB search
MGSSSLLLFPSSSSSATHSSYSPSSSSHAITSLLPPLPSDHHLLLYLDHQEQHHLAAAMV
RKRPASDMDLPPPRRHVTGDLSDVTAAAAGAPTLSASAQLPALPTQLPAFHHTDMDLAAP
APPAPQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASIL
ELRLRSLLNSDPAPPPPPPSHPALLPPDATAPPPPPTSVAALPPPPPAQPDKRRREPQCQ
EQEPNQPQSPKPPTAEETAAAAAAAAAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCA
ESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSP
AGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGL
FHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEK
LGVTRREAVAVHWLRHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEA
IHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQ
SGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPIQASGR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcctccctcctcctcttcccctcctcttcctcctccgccacccactcctct
tattctccctcctcctcctctcatgccatcacctccttgctgcctcctctcccctccgac
caccatctcctcctctacctagaccaccaagaacaacaccacctcgccgccgccatggtc
cgcaagcgccccgcctccgacatggacctgccaccgccgcgccgccatgtcaccggcgac
ctgtccgatgtcacggccgccgcggcgggcgcgccgacgttgtctgccagcgcgcagctc
cccgcgctgcccacgcagctcccggcgttccaccacacggacatggacctcgccgcgccc
gcgccgccggcgccgcagcaggtggcggcgggtgagggtgggccgcccagcacggcttgg
gtggatggcatcatccgtgacatcatcgccagcagcggcgccgcggtctccgtcgcgcag
ctcatccacaacgtgcgtgagatcatccggccatgtaaccccgacctcgcgtccatcctc
gagctccgcctccgctctctcctcaactccgaccccgcgccgccgccgccgccgccgtcg
catcctgctctcctccctcccgacgccacggcgccaccgccaccacccacgtcggtcgcc
gcgctccctccccctccgccagcgcagcccgacaagcggcgtcgcgagcctcagtgtcag
gagcaggagcccaaccagccgcagtcgccgaagccccccaccgcggaggaaaccgccgcc
gccgccgcggccgccgcagcggcggctgccgcggccgccaaggagcgtaaggaggagcag
cggcggaagcagcgcgacgaggagggcctccacttgctgacgctgctgctccagtgcgcg
gagtcggtgaacgcggacaacctggacgaggcgcaccgcgcgctgctggagatcgcggag
ctcgccacgccgttcggcacctcgacgcagcgcgtggcggcctacttcgcggaggccatg
tcggcgcggctggtgagctcgtgcctggggctgtacgcgccgctcccgagcccgtccccg
gcgggcgcgcgggtccacgggcgcgtggcggcggcgttccaggtgttcaacgggatcagc
ccgttcgtgaagttctcgcacttcacggcgaaccaggcgatccaggaggcgttcgagagg
gaggagagggtgcacatcatcgacctggacatcatgcaggggctccaatggccggggctg
ttccacatcctggcgtcgcggccgggggggccgccgagggtgaggctgaccgggctgggg
gcgtccatggaggcgctggaggcgacggggaagaggctgtcggacttcgcggacacgctg
ggattgccgttcgagttctgcccggtggctgacaaggccgggaatctggacccggagaag
ctgggcgtcacgcgccgcgaggccgtcgccgtccactggctgcgccactccctctacgat
gtcaccggctccgactccaacacgctctggctcatccagaggttggcgccaaaggttgta
acaatggtggagcaggatctgagccactcaggctccttcctggcacgttttgtggaggcc
atccactactattcggcactgttcgactcgcttgatgcgagttacagcgaggatagcccg
gagcggcatgtcgtggagcaacaactcttgtcgcgggagatccgcaatgtgctagccgtg
ggcggtccagcacgcaccggcgatgttaagtttgggagctggcgcgaaaagcttgcgcag
tcgggcttccgtgtgtcgtcgcttgctggaagcgctgctgctcaggctgcactgctgctt
gggatgttcccttccgatggatacacgcttattgaggagaatggcgctctgaagctcgga
tggaaggatctgtgccttctcactgcctctgcttggcgcccaattcaggcttcgggacgt
tag
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