Oryza sativa japonica (Japanese rice): 4351389
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Entry
4351389 CDS
T01015
Name
(RefSeq) UPF0400 protein C337.03
KO
K15559
regulator of Ty1 transposition protein 103
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4351389
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
4351389
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Gene cluster
GFIT
Motif
Pfam:
CID
POL2_thumb
CTK3
DUF6374
CSN7a_helixI
Motif
Other DBs
NCBI-GeneID:
4351389
NCBI-ProteinID:
XP_015619977
UniProt:
B9GBN3
Q2QYA2
LinkDB
All DBs
Position
12:complement(join(1317491..1318363,1319390..1319425,1319522..1319661,1320919..1321075,1321189..1321362,1321473..1321720,1324788..1324917))
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AA seq
585 aa
AA seq
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MADTKAEAKAETIGGGGGGSGSFSEQAFVEKLNKLNNTATRIQTLSNWCIFHRKRARKVV
DTWEKQYNSANKDKKVSFLYLSNDILQNSKRKGGEFVNEFWRVLPGLLKDFYVNGGEDGK
KVVGRLIDIWDERKVFGTRIESLKNDILGGSTHTMGNNVNSSNPSPNPSSVSKAARKDSG
TVTRKLTVGGMPEKIVTAYQSVLDQHFDEDTALNKCNNAVSVLDRMDKDVDDACTQGIQQ
GSSLISDLQGQETVLKQCIEQLESVNMARITLINKLRKALGEQEAKSELLRNQLLVARAK
AEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPQFQPLHPATSL
PATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAGPPG
FESNKKPRLDNPIHASDMSAPPFFGQLPQVQPQIGATAALGGTQPPTQANQAAGSFPPPP
PPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPPLPNIMSAGFPRLSVPPPLPLPTQSQN
QSQPQQQQSPQAPQQSPTSTGFFQPPGAGFFPPVQVQQSPSAQRQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcggcggctct
ggctcgttcagcgagcaggcgtttgttgagaagcttaacaagctcaacaacacggcgact
aggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaaggttgtt
gatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcattcctgtac
ctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaattt
tggagggttcttcctggattattgaaagacttttatgtcaatgggggagaagatggaaag
aaagtagttggaagattaatagatatttgggatgagcggaaggtctttggaacccgtatt
gaaagtctgaaaaatgacattcttggtggtagcactcatacaatgggtaacaatgtcaat
agctcaaatccaagccctaacccctcttcagtttccaaagctgcgcggaaagattctggt
acagtaacaagaaaacttactgttggcgggatgccagaaaagattgtaacagcatatcag
tcagtgcttgatcaacattttgatgaagacacagctttaaacaaatgcaataatgctgtt
agtgttttggataggatggataaagatgtagatgatgcttgtactcaaggtattcagcaa
ggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaagcagtgcattgag
caacttgaaagtgtcaacatggctagaataaccctaatcaataaactaagaaaagccctc
ggcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcttgtggctcgagcaaag
gctgaacatgccatgcaactaaaacaacgacttggtagtgccttgaacaatggtgcagga
tctagttctagtccactgatggttacacttccaccaggacaaacagctgccatgatgcag
aattcagcagcaatgccgatatttccccagtttcaaccactgcatccagcaacctcactt
cctgccacatccagtgctgttggtgatgagcccaaaaaaactgcagcagctatggcagat
aagcttgcatctttgtcagctcctgagaaggtgctctcctccattttctcttcccttgct
gctgaacaagcaaggaatagtggttcgacttctggagatctttctgcaggacctccaggc
tttgagagcaataagaagcctaggcttgacaaccccattcatgctagtgacatgagtgct
cccccattctttgggcaactgccgcaggtgcaaccacagattggagcaacagctgctctt
ggaggcacacagccaccaacccaagcaaaccaagcagctggttcatttccaccacctcca
cctccattaccacttatgccacaatttgttcaaaatactggaggaatgtttggaatggga
ccttttgggatggtgagtggctctgcgccacctccacccccattgcccaacattatgtca
gcaggttttccaagactaagtgtgcctccacctctgcctctgcctacacaatctcagaac
cagagccagccccagcagcagcagtctccacaggcaccacagcaatcgccgacctcgact
ggattttttcaaccaccaggtgctgggttcttcccaccagtgcaggttcagcaatctcca
tctgcccaacggcaatga
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