Oryza sativa japonica (Japanese rice): 4351390
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Entry
4351390 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4351390
03400 DNA repair and recombination proteins [BR:
osa03400
]
4351390
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4351390
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Atypical E3
4351390
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
4351390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-HC5HC2H
SLX1_C
Motif
Other DBs
NCBI-GeneID:
4351390
NCBI-ProteinID:
XP_015619076
UniProt:
A0A8J8XN28
B9GBN5
LinkDB
All DBs
Position
12:join(1329465..1329582,1329924..1330120,1330200..1330280,1330407..1330640,1330753..1330830,1330903..1331205)
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AA seq
336 aa
AA seq
DB search
MAPLSWRHHTLLQALLSRGPLSERDFHALFSAISGGKNPATHRHLFNDTLLKINKELAYL
QFELRAGINQYDGTVYYGVVNNIADEESKLGSKFSVPQIAFYKGLLEAIVHEAGNDGSIT
NIDALNTRIENQVVIADASQGSQSRLPTSITNFSLSQKEKTLNELIQDRWLSYTPTGKIG
LGIRSFLDLRSWLRSNDIPSCEVCNEACIKASSCPNEGCNVRIHVYCLKKKFSQRKASRA
CGCGTEWPRLEGEDDGAEDVNEPEEDQVPSANQHSRTRRRGVKSELVEENERAGPSARMT
RRSLRSSKAEAVEAAQEVPSAAGPSQSTRASKRRKN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctctcgtggcgccaccacacgctgttgcaggcgctgctctcccgcgggccc
ctctcggagcgcgacttccacgccctcttctccgccatctccggcggcaagaaccccgcc
actcatcggcatctgttcaatgatacactcctcaagatcaacaaggagctcgcatacttg
cagtttgagttaagagcaggcataaaccagtatgatggtactgtgtattatggagtggtc
aataacattgctgatgaagagtcaaagcttggatcaaagttttctgtgccacagattgca
ttctacaagggattgttggaagcaatagttcatgaagctggaaatgatgggagcataaca
aatatcgatgctcttaacacacggattgagaaccaggttgtaattgcagacgcttcacag
ggcagtcaatcccgtctgcctacttccattaccaacttctcattgtcccaaaaggagaaa
actcttaatgaactcatacaggatcgttggctgtcatacactcccacaggaaagattggt
cttggcatacgatcatttcttgatctccgaagttggttacgtagtaatgatatcccatca
tgtgaggtctgcaatgaagcttgcataaaggcatcatcttgtcctaatgagggatgcaat
gtaaggattcacgtgtactgtttgaagaagaaattttctcagagaaaggcctcgagagct
tgtggttgtggtactgaatggcctcggttggagggtgaagatgacggtgctgaggatgtt
aacgaacctgaggaagatcaggtcccatcagccaaccagcattcgaggactagacgcaga
ggagtcaaatctgaactggtggaagaaaatgaaagagcaggcccatcagcgaggatgaca
aggaggagtttgagaagctctaaagcggaagcagttgaggctgctcaagaggtgccatct
gcagcaggaccttcgcagtcaaccagggcatctaagagaagaaagaactaa
DBGET
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