KEGG   Oryza sativa japonica (Japanese rice): 4351405
Entry
4351405           CDS       T01015                                 
Name
(RefSeq) aladin isoform X2
  KO
K14320  aladin
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4351405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4351405
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4351405
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 Beta-prop_IFT122_1st ANAPC4_WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_EIPR1 Tricorn_2nd Beta-prop_HPS5 Beta-prop_EML
Other DBs
NCBI-GeneID: 4351405
NCBI-ProteinID: XP_015620616
UniProt: B7F8R8
LinkDB
Position
12:complement(join(1429937..1429990,1430073..1430160,1430262..1430399,1430846..1430897,1431002..1431101,1431789..1431864,1431940..1432027,1432115..1432173,1432338..1432520,1432644..1432743,1432903..1433017,1433218..1433382,1433482..1433537,1433631..1433688))
AA seq 443 aa
MPSFPPPGGVTVCEINRDLVVADALSDDRAKDAYGDVLGMVFSPIPFQPDATVATHEPPA
VTEAAEPAEVVPRTSLASTIAESFKQMLFPSCNPNLLQEIDTQKVSWNPHKHCLAFVSGK
NQVTVHDFEEPDNKESYILTSDHQKDVKAVEWRPNSGKVIAVGCKGGICLWSASYPGNVA
SVKSGVTSSSFGAFPRGSGGQWILVDILRGSSAELVSALCWKPDGRYLVSASCNSPSFTI
WDVSQGLGTPIRRGLSSISLVRWSPSGDYLLTAKLDGTFHLWETNTWTSEPWSSSNGYVS
GANWDPEGRTALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEISSLIVSRGIDKLAWD
SSGERLALSFKDGNEMYHGLVAVYDVRRSPLVSVSLVGFIRGPGDGAKPLAFAFHSKFKQ
GPLLSVCWSSGWCCTYPLILRPH
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgccgagcttccctccgcccggcggcgtcaccgtctgcgagatcaaccgtgacctcgtt
gtggcggatgcgctgtccgatgatcgagccaaggatgcctacggggatgtcctcggaatg
gtcttcagcccgattcctttccagccggatgcgactgttgccacccacgagcctcctgct
gtcactgaagctgctgagcctgctgaagttgtccccagaacaagtttagcttccaccata
gctgagtccttcaaacaaatgctcttcccttcgtgcaatccaaatctgctacaagaaatt
gatacccagaaagtaagttggaatcctcacaagcattgcttggcatttgtatctgggaag
aaccaagttacagttcatgactttgaggagccagataataaagaatcctacattctaaca
agtgaccatcaaaaggatgttaaagctgttgaatggaggccaaatagtggaaaggtgatt
gcagttgggtgcaagggagggatatgcctctggtcagcatcatatcctggcaatgttgca
tctgtgaaatctggtgtcacctcttcttcttttggtgcctttcctagaggttccggtggt
caatggatactcgtggacattctccgtggttcttctgctgagctagttagcgcactttgt
tggaaacctgatggaagatacttggtatctgcctcttgtaatagcccatcattcacaatt
tgggatgtttctcaagggttgggaacgcctataagacgtggattaagtagtatatcatta
gtgcggtggtcacctagtggagattaccttttaactgctaagcttgatggaacttttcac
ttatgggaaacaaatacatggacgtcagaaccatggtcttcatctaatggatatgtgtct
ggagcaaattgggacccagaaggccgtactgcattattatccttttctaactcaacaaca
ctgggctcaattcacttctcatcaaagccaccatctttagatgcccatctcctaccagtc
gaactacctgaaatttcctctctgattgtcagccgaggcatagataaattagcatgggat
tcttcaggagagcgcttggcattatcattcaaagatggtaatgaaatgtatcatggcctt
gttgctgtctatgatgtgaggagatctccacttgtctcagtttcactagttggattcata
agaggacctggagatggagcaaagccacttgcatttgccttccatagcaaatttaagcaa
ggaccattgctttctgtgtgctggagcagtggctggtgttgtacatatcccctcatactt
cgtcctcattga

DBGET integrated database retrieval system