Oryza sativa japonica (Japanese rice): 4351534
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Entry
4351534 CDS
T01015
Name
(RefSeq) syntaxin-81 isoform X1
KO
K08492
syntaxin 18
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
osa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4351534
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
4351534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4351534
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
4351534
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6331
Motif
Other DBs
NCBI-GeneID:
4351534
NCBI-ProteinID:
XP_015620666
UniProt:
B9GBY2
A0A8J8Y7I7
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All DBs
Position
12:join(2704614..2704691,2704815..2704898,2704984..2705088,2705484..2705630,2706254..2706511,2706604..2706735,2707582..2707728)
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AA seq
316 aa
AA seq
DB search
MSRVRDRAEDFKESVRVAALGHGYTESQLAALMSSFIIRKPPPKLPFTKAAIKTLESIRE
LEKFIVKHRKDYVDMHRTTEQERDNIEHEVSVFVKACKEQIDILKNRIHEEKGGSTKTWL
GTSDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRTMRFQDAINRAMPRKRIQKKRET
KAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETK
MIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLF
FFVLTFSVLFLDWYSK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggttcgcgacagggccgaggacttcaaggagtccgtccgcgtcgccgcgctc
ggccatgggtacacggagtctcagttagccgcgctcatgtcttctttcatcatccggaag
ccgccccccaaattaccctttacaaaggctgcaatcaagacgcttgagagtatcagggaa
ctggagaagtttattgtgaagcataggaaggactatgttgacatgcatcgcaccacggag
caagaaagggacaacattgagcatgaggtcagtgtttttgtaaaagcatgcaaggaacaa
atagatatcctaaagaacaggatccatgaagaaaaaggtggaagtacaaagacatggctt
ggtacaagcgatgagagctcccggttggatttgatagctcaccagcatggtgtggttttg
attttgagtgagcgtcttcactcagtaactgcacaatttgatcgtcttcggaccatgcgt
tttcaagatgctattaacagagcgatgccaagaaaacggattcagaagaaacgagaaacc
aaagctgctgaaccatctaagccaaaccttgtattaaaatctgatgtttcaaaggttgaa
gatcaggaggtctctactgcaccactaagagttcaagaacaactcttggatgatgaaaca
agagctcttcaggtggagttgacaaatcttcttgatgctgtccaagaaacagagacaaag
atgatagagatgtcagcacttaatcatctcatgtcaacacatgttctacaacaagctcag
cagatacagtatttatatgaccaggcagttgaagctacaaacaatgtggagcgtgggaac
aaggagctatcccaggcgatccagcgcaacagcagcagtagaaccttcctcctgcttttc
ttctttgttcttaccttttccgtcctctttctggattggtacagcaaatga
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