KEGG   Oryza sativa japonica (Japanese rice): 4351590
Entry
4351590           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K15361  WD repeat-containing protein 48
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    4351590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    4351590
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     4351590
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st DUF3337 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT140_1st RAWUL ANAPC4_WD40
Other DBs
NCBI-GeneID: 4351590
NCBI-ProteinID: XP_015620169
UniProt: Q2QX93 Q0IPV8
LinkDB
Position
12:complement(join(3333056..3333154,3333898..3334077,3335569..3335662,3336845..3337197,3337455..3337589,3337669..3337707,3337902..3337967,3338054..3338149,3338606..3338842,3338917..3339037,3339169..3339204,3341377..3341474,3341613..3341906,3341995..3342084,3342157..3342219,3342595..3342753,3342872..3342970))
AA seq 752 aa
MHRVGSAGNTAGSSRPRKEKRFTYVLNDADNKKHCAGINCLSYLNASTSGTSDYLFTGSR
DGTLKRWEPKNGVASFSATFESHVDWVNDAIIVGQNLVSCSSDTTLKVWNCLSDGACTRT
LRQHSDYVICLAASEKNSNIVASGGLGGEVFIWDLDSSLAPVAKSVDAKEDEAPNGNSGP
ALTTLCNVNSSSNLASTNGQSHGYSPITAKGHKDSVYALAMSDTGNTLVSGGTEKVVRVW
DPRTGSKKMKLRGHTDNIRALLLDPTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV
WALASTPSFSHVYSGGRDQSVYLTDLSNRESVLLCTNEHPILQLSLQDDMIWVATTDSSV
NGWKAEAHEPLKLFQKGSSFLAGNLSFSRARASLEGSAPVPIHKEPSSIIPGVPAITQHE
ILNNRRHVLTKDTAGSVKLWEITRGAVIEDFGKVSFEDKKKELFEMVSIPAWFTMDARLG
CLSVHLDTPQCFSAEIYAVDLNVAGAQEDLKINLAQETLRGLLVHWSKKKQRSGSHGLSN
GDTSTGKDVSLKNLPHPRSEVDDGAENHASQMLPSFEFSTVSPPSIITEGSSGGPWRKRI
TDLDGTESDIPWWIVDCVEHNRFPKENTKCGFYLHPAEGSPAPNITQGKLSAPRILRIHK
VANYVVEKLDRPLDGNADSTFGMGLTSGQSQFSALDSSSRLGLKPWQKLKPSVEILCNSQ
VLAPEMSLATVRAYVWKKPEDLILNYKVVQSR
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcatcgtgttggaagtgctggtaacacggcaggttcaagtcgaccgagaaaggagaag
cgctttacatatgtgctgaatgacgctgataacaaaaagcattgtgctgggatcaactgc
ttgtcatacctaaatgcctctacttctggtacgagtgattatctttttaccgggagtcgg
gatggtaccttgaagaggtgggaaccaaaaaatggagtcgcaagcttctcagcaactttt
gagtcacatgttgattgggttaatgatgccattattgttggccaaaatcttgtttcctgt
tcctcagataccactctaaaggtgtggaattgtttatcagatggtgcttgtaccaggact
ctccgccagcattccgattatgtgatttgtcttgctgcatctgaaaaaaatagcaatatt
gttgcctctggtggccttggcggtgaggtctttatatgggaccttgattcttctcttgct
cctgtggccaaatctgtagatgcaaaagaggatgaagctcctaatggaaactctgggcct
gctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccaccaatgggcaa
tcacatgggtacagtccaatcactgccaaaggtcacaaagattcagtttatgcattggcc
atgagtgacacaggaaacacacttgtctctggtggtactgaaaaggttgttcgcgtttgg
gatcccaggactggttcaaagaaaatgaaattgagagggcacactgacaatatcagggct
ttacttcttgatcctactggcaggtattgtctttcaggctcatctgattcaatgataaga
ttatgggatctgggacagcagcgatgtattcattcttatgctgtgcatactgattcagtc
tgggcgcttgcaagcactccttcgtttagtcatgtttatagtggtggaagagatcagtcg
gtgtacttgacagatttaagcaatcgagagagtgtcttgctctgcacaaacgagcacccg
attctacaattgtccttgcaggatgatatgatttgggttgcaacaactgattcttctgtg
aatggatggaaagctgaagcgcatgaacccctaaagcttttccaaaaaggttcttcattc
ttagctggcaatttgtcattctccagggcaagggcttctttagaaggatcagcacctgtc
cctatacacaaagaaccatcttcaattattcctggagttccagcaataactcagcatgag
atcctgaataatagaagacatgtattgacgaaggatactgctggttctgtcaaattgtgg
gagattactcgaggagctgttattgaagactttggcaaggtttcttttgaggataagaaa
aaagagttgtttgagatggttagcatacctgcctggtttaccatggatgctcgattggga
tgcctgtctgtccacctggatacacctcaatgcttttctgcagaaatatatgcagttgac
ttaaacgttgcaggagcacaggaagatcttaagattaatttggctcaggagactctccgt
ggtttgttagttcattggagtaaaaaaaagcagagatctggctcacacggcttgtcaaat
ggtgacacttcaacaggaaaagatgtatccttgaaaaatttgccccatccaagatctgag
gttgatgatggggctgaaaatcatgcaagtcagatgcttccctcatttgagttttccaca
gtttcgcctccatcaatcatcacagaaggttcaagtggagggccttggagaaagagaatt
acagatttagatggaaccgagagcgatatcccatggtggattgtggactgtgttgagcat
aatcgatttccaaaagagaatacaaagtgtggattctacttgcatcctgctgaagggtca
cctgcaccgaacataacacaagggaaacttagtgctccacggatattgcggattcacaaa
gtagctaactatgtggtcgagaaacttgatagaccactggatggcaatgctgacagcaca
tttggaatgggattgacttctggccaatcacaattttcagcgctagatagttcttcacgg
cttggactaaaaccatggcaaaaattgaaaccttctgtagagatattgtgtaacagccag
gttttggcacccgaaatgagcttggccacagtgcgggcttatgtctggaagaagccagag
gatttgattcttaactacaaagtggtccagtcaagatga

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