Oryza sativa japonica (Japanese rice) (RefSeq): 4351654
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Entry
4351654 CDS
T01015
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4351654
03420 Nucleotide excision repair
4351654
03430 Mismatch repair
4351654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4351654
03036 Chromosome and associated proteins [BR:
osa03036
]
4351654
03400 DNA repair and recombination proteins [BR:
osa03400
]
4351654
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
4351654
DNA Replication Termination Factors
ELG1-RFC complex
4351654
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
4351654
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
4351654
Check point factors
HRAD17(Rad24)-RFC complex
4351654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_16
AAA_assoc_2
AAA_14
AAA_24
ResIII
AAA_5
AAA_11
DNA_pol3_delta
PhoH
AAA_19
DUF2075
AAA_23
AAA_25
AAA_30
AAA_7
IstB_IS21
bpMoxR
AAA_18
RNA_helicase
AAA_28
DUF3853
Motif
Other DBs
NCBI-GeneID:
4351654
NCBI-ProteinID:
XP_015618344
UniProt:
Q9FXM3
LinkDB
All DBs
Position
12:3873310..3877273
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN
RILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIP
EDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcctcgcagccatgggtggagaaataccggccgaggcaggtg
aaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccaccaccctccagaccgcc
gaccttccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgctt
gccattgcttaccagctctacggtccagagctctacaagtcaagagttctagaacttaat
gctagtgatgatcgtggaattaatgtggtgaggactaagatcaaggactttgctgctgtt
gctgttggttctgcacgaaaaggcggttatccctgcccaccatacaagattattatacta
gatgaagcagattcgatgacagaagatgcccagaatgctttaaggcgtactatggagact
tactccaaagtgacaagattctttttcatatgcaattacatcagcaggataatagaacca
cttgcatcaagatgtgcaaagtttagattcaagcctctttcagaagaagtaatgagcaat
cgcattttgcatatatgcaatgaagaagggctcagtcttgatgctcaggcattggctaca
ctaagcaccatctctaatggtgacctccgccgtgctataacctatcttcagagcgctgct
cgcttatttggatcttctatttcttctactgacttgattagtgtttcaggggctatccct
gaagacgttgtcaagtcattgcttgcatcttgcaaatctggtgaatttgatgtggcaaac
aaggaagtcaataatattattgcagatggataccccgtttcacagttgatctcacagttt
ctagatgtgatagttaatgccgatgatattccagatgagcagaaggcaagaatatgtaaa
aagcttggggaagcagataagtgcttggtcgatggagcggatgagtatttacagcttttg
gatgtggctagtgagactatccgtgctctttttgacatgccacaaacgctggtcttctaa
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