Oryza sativa japonica (Japanese rice): 4351716
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Entry
4351716 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4351716
Enzymes [BR:
osa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
4351716
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4351716
Prokaryotic type
4351716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
4351716
NCBI-ProteinID:
XP_015620217
UniProt:
Q2QWH9
B9GC99
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All DBs
Position
12:join(4895010..4895312,4901778..4901834,4902307..4902384,4902856..4902909,4903150..4903232,4903458..4903557,4903631..4903693,4904067..4904342,4904881..4904941,4905048..4905148)
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AA seq
391 aa
AA seq
DB search
MSAATPDSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVRSG
EMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRT
DTGVHALSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAP
DFHARYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSF
RATGCQANSPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKGSD
ASSTSEQSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVE
RILNLKAVTAAPPMAPACGLYLANVKYDLSV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccacccccgactccgccgccgccgccaagcgccccatcgacccctcccac
gccgacccgtcgccggcggcgaagctccagaggtcgtccccgccggatccctcgccgccg
gctgaggcgcagggcgacgccactgacggcggcggcgaagtggctggggtgagaagcggg
gagatggccggcgcgcggaaccctcaggcgcagcggtacctggtcgccgtggagtacgtc
ggcacccggttctccggctcccagcagcagctcaaccagcgcaccgtcgtcggcgtcctc
gaggaggcatttcacaaattcattggtcagccagtctcaatcttctgttctagtcgaacg
gacacaggtgttcatgctttatcaaatgtttgtcatgttgacgtggagcggataagtaaa
agaaagcctggtgaaatgttgccacctcatgagcctggagttgtaaaacgtgcagtgaac
cattttctacagaagaatgaaggtgacataatggtgactgatgtccgttgtgttgcacca
gacttccatgctagatacaaagccctagagcgcacgtaccactatcgtttgctttctgga
tctgagccactatcagtttttgagaaaacctctgcttggcacatacccgaggatttaaat
gtacaggcaatgaagaaagcgtgcagcatacttgttgggcatcatgatttcagttcattt
cgagcaactggatgtcaggcaaactctcccatgagaactttggatgagcttagtgttaca
gaagtatttccttccatgttttttccttcaagcatggagcgatcagagatggagtcatta
gatgggcatcttgtttattcaagaacgtcagttgtggaatcttctggaaaaggatctgat
gcttctagtacaagtgagcaatcaagatttgagaatggagaagaatttggaaagaggcta
aggcatcgttgcttcgttgttactgcacgggcacgttcatttctttaccaccaggtaagg
ttaatggttggtcttctaaaatctgttggtactggagatctaacaactgaagatgttgag
agaattctgaatttaaaggcagtgactgcggcacctcctatggcacctgcttgtggtctc
taccttgccaacgtgaaatatgacctgagcgtttga
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