Oryza sativa japonica (Japanese rice): 4351781
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Entry
4351781 CDS
T01015
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4351781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4351781
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
4351781
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4351781
Prokaryotic type
4351781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Whib
Motif
Other DBs
NCBI-GeneID:
4351781
NCBI-ProteinID:
XP_015619427
UniProt:
Q2QW21
Q0IPE3
LinkDB
All DBs
Position
12:join(5883601..5884005,5884125..5884184,5884646..5884762,5884856..5884953,5885313..5885863,5885961..5886064,5886141..5886230)
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AA seq
474 aa
AA seq
DB search
MAKNPKAAKNRRPTTRRPRAAAATATATASASADIEDLASPSGCRAVAGPTTAAAAVRAE
LLRWYDANRRDLPWRRAAEPPAGSGSGRGEEQRAYAVWVSEVMLQQTRVPVVVDYYSRWM
ARWPTVDSLAAATQEEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPCTASTLREVRGIG
DYTAGAIASIAFNEVVPVVDGNVVRVISRFYAIPDNPKESSTVKRFWQLTGELVDPSRPG
DFNQAMMELGATLCSKTKPGCSQCPVSSHCQALALSSQNASVKVTDFPRVVPKAKPRSDF
AAVCVVQISQGFGEGIAEAEGKDNLFLLIKRPEEGLLAGLWEFPSVLVNEGKTDTLNRRK
EMDKYLKQLLSIDVTRRSSVILREDVGQHVHIFSHIRLTMFVELMILNLKDDGEELCKEG
QDSTKLRLINENAVQSMGLTSGIRKVYNMVKVFKEKRLKEQSQVPTRKRSRRLK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaccccaaggcggccaagaaccgccgccccacgacgcggcgacctcgcgcc
gccgccgccaccgccaccgccaccgcctccgcctccgcggacatcgaggacctggcgtcg
ccgtccgggtgcagggcggtagcggggcccaccacggccgccgcggcggtgcgcgcggag
ctgctgcggtggtacgacgcaaaccggcgcgacctgccatggcggcgcgccgcggagccg
ccggcggggagcgggagcgggcgcggcgaggagcagagggcgtacgcggtgtgggtgtcg
gaggtgatgctgcagcagacgcgggtacccgtggtggtcgactactactcccggtggatg
gcccgctggcccaccgtggacagcctcgccgccgccacgcaggaggaggtgaacgagatg
tgggcggggctcgggtattaccggagggctcgatttctgctcgagggagcaaaacaaatt
gttgaaaaaggcgagttcccttgcacagcatcaacactccgtgaagttcgtggcattggg
gattacacagcaggagccattgcttccatagccttcaatgaggttgtccctgttgtggac
ggaaatgttgttcgagttattagcaggttttatgctattcctgataacccaaaggagtcc
tcaacggtgaagagattctggcagctcactggtgaactggttgacccttcaaggccagga
gacttcaaccaagcaatgatggaactaggagcaacactctgcagcaagacgaagcctggt
tgctctcagtgccctgtctctagccactgccaagcgctcgcactttccagccaaaatgct
tcagtcaaagttacagacttcccacgagtagtcccaaaagccaaaccacggtctgatttt
gctgctgtctgtgttgttcaaatttcacaaggctttggtgaaggtatagcagaggcagag
ggcaaagataatctttttctactgatcaagaggccagaagagggccttctcgctgggctc
tgggagttcccatctgttcttgtgaacgaagggaagactgatacgctgaataggagaaaa
gagatggacaaatatttgaagcagcttcttagcatagatgttacaaggagatccagtgtg
atcctcagggaagatgttggccaacatgttcacattttctcacacattcggctgacgatg
tttgttgagctgatgattttgaacctcaaagatgatggggaggaattatgcaaggaggga
caagatagcaccaaactgagattgattaacgaaaatgcagtccagtcgatgggattgaca
tcaggaatccggaaggtgtacaacatggtcaaggtcttcaaggagaaaaggctgaaagag
cagagccaagtgccgacgaggaaaaggagtagacggctgaaataa
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