Oryza sativa japonica (Japanese rice): 4351828
Help
Entry
4351828 CDS
T01015
Symbol
CLPC2
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
osa03110
]
4351828 (CLPC2)
Chaperones and folding catalysts [BR:
osa03110
]
Heat shock proteins
HSP100
4351828 (CLPC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
UVR
Sigma54_activat
AAA_22
TniB
nSTAND3
NBD_SMAX1
AAA_14
AAA_18
Zeta_toxin
AAA_28
NACHT
AAA_25
RsgA_GTPase
IstB_IS21
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
4351828
NCBI-ProteinID:
NP_001410297
LinkDB
All DBs
Position
12:complement(join(7134403..7135581,7135958..7136047,7136149..7136224,7136472..7136689,7136824..7137039,7137244..7137429,7137503..7137625,7137721..7137836,7138576..7139131))
Genome browser
AA seq
919 aa
AA seq
DB search
MAGTLLQPVALGTTFAGRVSGQRWKSHGTRRPPSMLAMSLSRPVKMAAFVGLRSVHSFSV
TPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI
LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLE
EARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMIGETTEAVGAGV
GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPG
VGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQS
DEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE
RRFQPVRVPEPTVDETIEILRGLRERYEIHHKLRYTDDALISAAKLSYQYISDRFLPDKA
IDLIDEAGSRVRLRHAQVPEEARELDKELKQITKDKNEAVRSQDFEKAGELRDREMELKA
QITALIDKSKEMSKAETESGETGPLVNEADIQHIVSSWTGIPVEKVSSDESDKLLKMEET
LHQRVIGQDEAVKAISRSIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGS
EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPD
VFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSY
SRIKSLVVEEMKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQ
VTEKFKERIVDEGFNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKV
IVLNGQSGLPELSTPAVTV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagt
ggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttg
agccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtc
acgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgt
gctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttata
atgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaatt
ctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggc
ataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttc
gttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaa
gaagctcgtcagctaggacacaactatattggatctgagcacttgcttcttggactgctc
cgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaat
attcgcacgcaggttatccgaatgattggcgagactacagaagctgttggtgcaggagtt
ggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaaca
aaattagcagaggagggaaagctagatcctgttgttggaaggcaaccccagattgagcgt
gtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggt
gttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcct
gaaacaattgaaggaaagaaggtcattacccttgatatgggacttcttgttgctggtaca
aaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagt
gatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgag
ggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacagtgt
attggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaa
agacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctc
agagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctg
atttcagctgccaagctatcttatcaatacatcagtgatcgtttcctcccagataaagca
attgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggttcctgaa
gaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtc
cgtagccaggacttcgaaaaggctggagagttacgtgatcgtgaaatggaattgaaggcc
cagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggg
gagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggt
attccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagact
ttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgc
cgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggt
ccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatct
gaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaag
ttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggca
gttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagat
gtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaaga
acagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatc
gagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctac
agcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctc
aaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatc
gccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccag
gtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcg
aggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgcta
gctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtg
attgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtag
DBGET
integrated database retrieval system
