KEGG   Oryza sativa japonica (Japanese rice): 4351976
Entry
4351976           CDS       T01015                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    4351976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4351976
   03110 Chaperones and folding catalysts [BR:osa03110]
    4351976
   03029 Mitochondrial biogenesis [BR:osa03029]
    4351976
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4351976
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     4351976
Messenger RNA biogenesis [BR:osa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     4351976
Chaperones and folding catalysts [BR:osa03110]
 Heat shock proteins
  HSP60 / Chaperonin
   4351976
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    4351976
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4351976
  Exosomal proteins of other body fluids (saliva and urine)
   4351976
  Exosomal proteins of breast cancer cells
   4351976
  Exosomal proteins of colorectal cancer cells
   4351976
  Exosomal proteins of bladder cancer cells
   4351976
SSDB
Motif
Pfam: Cpn60_TCP1 MatP_C
Other DBs
NCBI-GeneID: 4351976
NCBI-ProteinID: XP_015620475
UniProt: Q2QU06 Q0INX9
LinkDB
Position
12:join(10354855..10354911,10355149..10355302,10356208..10356329,10356434..10356641,10356790..10356935,10357066..10357372,10357812..10358263,10358534..10358824)
AA seq 578 aa
MASANAISTASLLRSFSSQGRVRRAKNGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLA
NAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSA
GDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKARPVKGSGDIK
AVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFV
TNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVN
KLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVTI
HQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAAT
ETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTTVPAIKETIEDHDERLGADII
QKALVAPASLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRCA
LQNAASVAGMVLTTQAIVVEKPKPKAPVAEPAEGTLTV
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcgtccgccaacgccatctccaccgcctccctcctccgctctttctcctcccagggg
agggtgaggagggccaagaatgggcgggcgcagcggctagtggtgcgggcggacgccaag
gacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaagctcgcc
aacgccgttggcgtcaccctcggcccacgagggagaaacgtagtgcttgatgagtacggc
agtcccaaagtggtaaatgatggagtcaccattgcccgggctattgagctatatgatccg
atggaaaatgctggtgcagcattgatccgtgaggttgctagcaagaccaatgattctgct
ggtgatgggactacaaccgcctctgtccttgctcgtgaaatcatcaagctgggccttttg
agtgtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcat
ggtcttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaa
gctgttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgct
attgacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagact
actgttgatgttgaagaaggaatggagattgaccgtggatacatttcccctcaatttgtg
acaaacctcgagaaatcgatcgtagagtttgagaatgctaaggttcttattactgatcag
aagatcaccagcataaaggagattcttccaatcttggagaagacaacacagttgagagct
ccactgtttattattgctgaggacattactggcgaagctttggcaacccttgttgttaat
aagctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgc
aaggctgtccttcaggatattgccattgtgacaggcgctgaatttctagcaaaagacctg
ggtttgctggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaata
catcagactacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagg
gttgcacagctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattg
gctgagaggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaact
gagactgagcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgca
gctattgaggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactacc
gtccctgcgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattatt
caaaaggcgttggtagctcccgcttcactgattgcccacaatgctggagtggaaggggaa
gtggtagttgagaagatcaaggacggcgagtgggaagtcgggtacaatgcgatgaacgac
aagtatgagaacttgattgaggcgggtgttattgacccagctaaggtgacgagatgcgcg
ctccagaatgccgcctcggtggctggaatggtccttaccacacaggccattgttgtcgag
aagccgaagcccaaggctcctgttgctgagccggcagagggaacccttaccgtctaa

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