KEGG   Oryza sativa japonica (Japanese rice): 4352003
Entry
4352003           CDS       T01015                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4352003
Spliceosome [BR:osa03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    4352003
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 4352003
NCBI-ProteinID: XP_015620723
LinkDB
Position
12:complement(join(11122466..11122683,11122768..11122966,11123045..11123197,11123363..11123434,11125195..11125503,11128181..11128218,11129221..11129422,11129892..11129963,11131976..11132045,11134277..11134459,11134758..11135030,11137468..11137532,11137775..11137978))
AA seq 685 aa
MATPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARFRLRRS
CPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKASKRITQHNDVHCIEGPEIVEKQPLP
TDDEMLAIEYKKDDDSNQQEGVQYNHQNVVNAASHYNTRNDDITLKRKCQDGERGSPGTS
KKKKLKVANTGKHTGCSNEDKAHQDQDHSGSKKLKSPCIDDAKKVMLAEADVTLEKEQIS
KRDNQTKLNSETKEDDCNTQSDIKKVSRSARRKKLKRQLRQKAKEQLKEKEHCQEQPTVA
DCPSSNNRDVLPSPSSNQNNSSLPFVRHEADEEESDTSDDIVPVVVRPGHIRFESAGGES
DKSPVKEIQTTFQWSGTTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSK
TSDNDFGLASNQKVGESSHVGSASEKIVAEKGKSSSEPLDFDSLYPLTRLPKEGDLIVYR
LVELSSSWCPELSSYRVGKVLIYDPISLRIILLPVPEYPFTAGEKNGEDESEMLVDMSPY
KEDGSLEIEYSSLLDIRLLKDTDSVQPAVSTPLTETGIKGGSHAQKPANLDNHKGKIHSE
KLPNNTKDPEATQEKTQNTVWEENGEVANDEPAVQENGWGTWTPNASTSAWSYRALRSSA
LGPTLAHLRGKNTKRGRPYNRKYGK
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcgacgccgccggcgcaggcggtgaggctccgcctggtcttcgacaaccagcgcatc
ctccggcggtcgctgagggagagcggcctccgccgctgctggctcctcctccccccggag
ctgtccaccgtctccgacctcgccgcgcacatcgcggctcggttccgcctccgccgctcc
tgccccagctgcgtcatcctctcgatagatggattcgtcttaccaccgtttgagtcgact
tgtatcttcagggacaatgacatcataagggtaaaacagaaagcttccaagaggataaca
caacataatgatgtgcactgtattgaaggtcctgagatagtagaaaaacaaccacttcca
acagacgatgaaatgctcgcaatcgaatataagaaggatgatgatagcaatcaacaagaa
ggtgtacagtataatcatcagaatgtagtcaatgcagcttctcactacaatacacgaaat
gatgatataactttgaagaggaaatgtcaagatggagaaagaggatcacctgggacctca
aaaaaaaagaaactgaaggtggcaaacactggaaagcacaccggttgcagcaacgaggat
aaagcccaccaagatcaggatcatagtggttccaaaaagttgaagtcaccatgtatcgat
gatgccaagaaggtgatgctagctgaagccgatgttaccttggagaaagagcagatatca
aagagggacaaccaaaccaagttgaatagcgaaacaaaggaggatgattgtaacactcaa
agcgatattaaaaaggtatctagaagtgctcggcgtaagaaactcaaaagacaacttaga
cagaaagccaaagaacaattgaaagagaaagagcactgtcaagaacaaccaaccgtggct
gattgtccatcgtcaaacaaccgagatgttttgccgtccccatcaagcaatcaaaacaac
tcgagcttgccatttgtaaggcatgaagcagatgaggaagaatctgatacatcggatgat
attgttccagttgtggttaggcctggccacattcgctttgagtcagcaggcggagaatca
gataaatcaccggtgaaggaaatacagacaactttccagtggagtggaactacaagcaaa
aagaagggtcagaagtggggaatggacaactcaaacaagaaaagctctgatatcagctat
catgggaggataactggaactgacactgaagttaaccaccatgtggctggcaactctaag
actagtgataatgattttggtttggccagtaatcaaaaggttggtgagagcagtcatgtt
ggatcagcaagtgaaaagattgttgctgagaaagggaagtctagcagtgaacctttagat
tttgacagcctgtatcccctaacacgacttcccaaggaaggagatctgattgtttatcgg
ttggttgaactgtcttcctcttggtgtccagagctttcttcataccgtgttggcaaagtt
cttatatatgatcccatatctttgaggatcattctcttacctgttcctgagtatccgttc
actgctggagaaaagaatggtgaagacgagtcagagatgctggtggacatgtcaccttac
aaggaagatggttccttggagatcgagtactcttcgcttcttgatattagactgctcaag
gacactgattccgtgcaaccggctgttagtactcccctgacagaaacaggcattaaaggt
ggatcccatgcccaaaagccagctaatttagataatcataaaggtaaaattcacagcgaa
aaactgccaaacaacaccaaagatccagaagccacgcaagaaaaaacacaaaacacggtc
tgggaggaaaatggagaggtcgcaaatgacgagcctgctgttcaggaaaatggctgggga
acttggacaccaaatgccagtacatctgcttggtcatatagagcactaaggagcagtgcc
cttggtccaacacttgcacatttgagaggaaaaaataccaagaggggtagaccttacaat
cggaagtatggcaagtga

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