Oryza sativa japonica (Japanese rice): 4352026
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Entry
4352026 CDS
T01015
Name
(RefSeq) WD repeat-containing protein GTS1 isoform X1
KO
K24758
WD repeat-containing protein 89
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
osa04990
]
4352026
Domain-containing proteins not elsewhere classified [BR:
osa04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
4352026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
4352026
NCBI-ProteinID:
XP_015620712
LinkDB
All DBs
Position
12:join(11481880..11482091,11482903..11483110,11484521..11484610,11485228..11485302,11487972..11488082,11488607..11488698,11488823..11488907,11490281..11490637)
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AA seq
409 aa
AA seq
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MEGGGEDTAAAMAMEVEIEAEAVLCMGTSSPATSNSSSPSPNSGISSRRLGLKNSIQTNF
GDDYVFQIASCQENSTLAVSLSTNALKLYSPATGQFLGECTGHSGSIHEISFSAPSSPQV
ICSCSSDGTIRAWDTRSFKQISLLRGSQELFSFSFGGSSGNLLAAGSNSQVLLWDWRNSK
QLACLEESHMDDVTQVKFAPHQHSKLISAAVDGLICVFDTDGDMNEDNHLLSVMNVETSV
AKVGFFGNTYQKIWCLSHIETLSTWDWNDGSRELNIDDARSLATDRWNLDHVDYFVDCHY
SLPDDKLWVIGGTTAGTIGYFPVRAGLEGAIGSAEAILEGGHTDVVRTVYPAANTHTGQN
RGIFGWTGGEDGRLCCWRSGEIAEMNKSWISSSLVSRVQKKAKCRQQPY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggcggagaggatacggcggcggccatggcgatggaggtggagatagaggca
gaggccgtcctatgcatggggacatcctcgcccgcgacgtccaactcctcgtctccaagc
cctaacagcggcatctcctcgagacgtttgggcctcaagaacagcatccagaccaacttc
ggcgacgactacgtcttccagatagcttcttgtcaggagaactctacgctcgcggtttcc
ttgtcaacaaatgcactaaaattatattctccagcaactgggcaatttttgggtgaatgc
actggacacagcggatcaatccatgaaatttccttttcagccccatcatccccacaagta
atctgttcttgttcttcagatggaactataagagcttgggatacaagaagctttaagcag
atatctttgctaaggggttctcaagaattgttcagcttctcctttggtggatcaagtggt
aacctacttgctgccggttctaattcccaggttctattgtgggattggagaaattctaaa
cagctagcatgcttagaggaatctcacatggatgatgtgactcaagtaaaatttgcacca
catcagcatagcaaactcatttctgcagcagttgatggattaatatgtgtttttgacact
gatggtgacatgaacgaggacaatcatttgctatctgttatgaatgtggagacttctgtt
gcaaaagtgggatttttcggcaacacataccagaagatctggtgcttgagccacattgaa
acattaagtacctgggactggaatgatgggagtagagaactgaatatagatgatgctcgt
tccttggcaactgataggtggaaccttgaccatgtggactattttgttgattgtcactac
tctctgcccgacgacaagttatgggtgattggcggcacaactgcagggacaataggttac
ttccctgtaagagctggtcttgaaggggcaataggttccgcggaagctatccttgaagga
ggccatacagacgttgttagaaccgtatatccagccgcaaacactcatactgggcaaaac
aggggcatttttggatggacaggtggcgaagatggtcgtctgtgttgttggcgctctggt
gaaattgctgagatgaacaagtcttggatctctagttcattagtgtcaagggttcaaaag
aaagctaaatgccgacaacagccatactaa
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