Oryza sativa japonica (Japanese rice): 4352037
Help
Entry
4352037 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4352037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4352037
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4352037
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
4352037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Tox-PL-2
Motif
Other DBs
NCBI-GeneID:
4352037
NCBI-ProteinID:
XP_015620528
UniProt:
A0A8J8YJV7
Q2QT85
LinkDB
All DBs
Position
12:join(12502228..12502353,12502434..12502490,12503979..12504071,12507245..12507323,12509716..12509840,12512867..12513010,12513905..12514135)
Genome browser
AA seq
284 aa
AA seq
DB search
MVGLSEGEKHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIATV
KAELGKPSILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAGA
AIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKVNVSLSATTD
EEPEVNVSDEEFLQFDTSSVPVIVTLTKVGKHYIVDATSEEESQMSSAVSVSVNRHGQIR
GLTKRGGAGLDPSVIFDMISVAKHVSRQFISVLDSETLAAEAAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggttgggctttcggaaggagagaagcacttcatccgcgggggcatcgcgcaggacctc
cgcaccgacggccgcaggcggctgcagttccgggccatctcggtcgagaccggagtcata
cctcaggcaaacggctctgcgcgtgttagactcggtgcgactgaagtcatagctactgta
aaggctgagttggggaaaccaagcattcttcatcctgataaagggaaagtttccattttt
gttgattgcagcccaactgcagcacccatgtttgagggtagaggttctgaagaattttct
gctgagctctgtgttgcactgcaaagatgcttactcggtggtaaaagtggggcaggggct
gcaattgatttatcctcactgattgtcgttgatggaaaggtctgctgggatctctacatt
gatggacttgttgttagttctgatggaaatttgcttgatgcattggctgctgcaataaag
gtggctttgagtgatacaggtatcccaaaagtcaatgtttctcttagtgctacaacagat
gaggaacctgaagttaatgttagtgatgaagaatttttgcaatttgacacctccagtgtg
cctgttattgttacattgacgaaggtaggtaagcactacattgtggatgctacctcagag
gaagaatctcagatgagctctgcggtttcagtatcagttaataggcatggtcaaatacgt
ggattgactaagaggggcggtgcagggttggatccaagtgtcatttttgatatgatatct
gtggctaagcatgtaagtcgacaattcatctcggtattggattcggagacattagctgct
gaagcggctgagtag
DBGET
integrated database retrieval system
