Oryza sativa japonica (Japanese rice) (RefSeq): 4352042
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Entry
4352042 CDS
T01015
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00906
Carotenoid biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
4352042
Enzymes [BR:
osa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
4352042
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GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
DUF2105
Motif
Other DBs
NCBI-GeneID:
4352042
NCBI-ProteinID:
XP_015618246
UniProt:
A0A8J8XAT6
Q2QT64
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Position
12:12204433..12208019
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AA seq
367 aa
AA seq
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MASHLLLRLPAPPPLLLHFPQRRVTLPQSRVSPTAPLLGARLVFSPASAVRPARARGSSI
GGAGEDDSDGEVDGAPRLVGEDSAAFRLGDQRVASWVYFGGILAVVLWGLNVLWIDPATG
VGTRFLEAVAAVSDNHEVTMLLLTIIFAVVHSGMASLRETGEKIIGERAYRVMFAGISLP
LAVSTVVYFINHRYDGIQLWQVQGISGIHELVWLSSFISFFFLYPSTFNLLEVAAVDKPK
FHMWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAVAASVGLIGHHLFGVWNGDRRLAS
RYGEAFEVLKKRTSVIPFAAVIDGRQKLPKDYYREFIRLPYLAITALTLGAYFVHPLMQA
SSYQLPW
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccatctcctcctccgccttcccgcccctcccccgcttctcctacacttcccg
cagcggcgagtgaccctgccacagagccgggtgtcccccacggcgccgctgctcggggcc
cgcctcgtcttctccccagcctccgccgtccgtccggcccgggcgagggggtcctcgatc
ggcggcgcgggggaggacgactcagacggcgaggtggacggggccccgcgcctcgtcggg
gaggactcggcggcgttccggctgggcgaccagcgggtggcgtcgtgggtctacttcggc
gggatactcgccgtggtgctgtgggggctcaacgtgctgtggatcgacccggccaccggg
gtcgggaccaggttcctcgaggccgtcgccgccgtctccgacaaccacgaggtcactatg
ctgctccttaccatcatttttgctgtcgtccatagtggtatggcaagcttacgtgaaact
ggtgagaaaataataggggagagagcttaccgtgtaatgtttgctggaatctcactgcct
ttagcagttagtactgttgtctactttataaatcatcggtatgatggcattcagctatgg
caagttcagggtatttcaggcatccatgagcttgtttggctctcatctttcatctcattc
ttctttttgtatccatctactttcaatcttttagaagtggcagctgttgacaagccaaaa
ttccacatgtgggaaactggaataatgcgcatcactagacatccacagatggttggacag
gtaatttggtgcttagcccacacgttatggattggcaattcagttgctgttgcggcatcc
gttggattaattggtcaccatctgtttggtgtttggaatggtgataggaggctggcatca
cgctatggtgaagcctttgaagttctgaaaaagagaacaagtgttattccttttgctgca
gttatcgatggaagacagaaactacccaaagattattacagggagttcatccggttacca
tatctcgcaatcactgcattaactttgggagcatactttgttcatcccttaatgcaggcg
tccagctaccaactcccttggtga
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