KEGG   Oryza sativa japonica (Japanese rice): 4352058
Entry
4352058           CDS       T01015                                 
Name
(RefSeq) serine hydroxymethyltransferase 4
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00260  Glycine, serine and threonine metabolism
osa00460  Cyanoamino acid metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00670  One carbon pool by folate
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
osa04981  Folate transport and metabolism
Module
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    4352058
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4352058
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    4352058
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4352058
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    4352058
Enzymes [BR:osa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     4352058
SSDB
Motif
Pfam: SHMT BRCA2
Other DBs
NCBI-GeneID: 4352058
NCBI-ProteinID: XP_015620540
UniProt: Q2QT32
LinkDB
Position
12:complement(join(12819807..12820051,12820911..12821012,12821094..12821484,12822471..12823328))
AA seq 531 aa
MAMASHHLAQPPTRAALSSRPTYPLSSHHHSSRLQLPLVSGARRSRLSPAVATSPVAAPA
MDAVADWGLTTLEEADPEVYDLVEREKRRQRAGVELIASENFTSLAVMEALGSPLTNKYS
EGMPGSRYYGGNEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGSPANFAAYTGLLQP
HERIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSETGYVDYDKLEEKAMDF
RPKLIICGGSAYPRDWDYARFRAIADKCGAMLLCDMAHISGLVAAQEAANPFQYSDVVTT
TTHKSLRGPRSGMIFYRKGLKPPKKGQPEGALYDYEDRINFAVFPSLQGGPHNHQIAALA
VGLKQTMSPGFKSYIKQVKANAVALGNHLMSKGYKLVTDGTENHLVLWDLRPLGLTGNKV
EKVCDLCSITLNKNAVFGDSSAMSPGGVRIGTPAMTSRGLVEEDFVQIAEFLHQAVTICL
DVQKERGKLLKYFNEGLENNKDIEDLRAEVEKFATSFEMPGFRVSDMKYKD
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggcgatggcttcgcaccacctcgcccagccgcccacgcgcgcggctctctcctcgcgc
cccacctacccgctctccagccatcaccactcctcccgtctccagctcccgctcgtcagc
ggggcgcggcgcagcaggctgtcccccgcggtggcgacgtccccggtcgccgccccagcg
atggacgccgtggccgactgggggctgaccactctggaggaggctgacccggaggtgtac
gacctcgtcgagcgcgagaagcggcggcagcgcgcgggcgtcgagctcatcgcgtcggag
aacttcacctcgctcgccgtcatggaggcgctgggctcgccgctcaccaacaagtactcc
gagggcatgccggggtcccgctactacggaggcaacgaggtcatcgacgaggtggaggag
ctctgccgcgcccgcgcgctcgccgccttccacctcgaccccgaggcctggggcgtcaac
gtgcagccctactccggctcgccggcgaacttcgccgcctacaccgggctgctccaaccc
cacgagcggatcatggggctcgatttgccgtccggcggccacctcacgcacggctactac
accgccggcggcaaaaagatctccgccacgtccatctacttcgagagcctgccgtacaag
gtgagctccgagacaggatacgtcgattatgataagctggaggagaaggccatggatttt
cggcccaagctcatcatctgcggcgggagcgcgtacccgcgggattgggattacgccagg
ttcagggccatcgcggataagtgcggcgccatgttgctctgcgacatggctcacatcagt
ggcctagttgccgcgcaggaggctgcaaatccttttcaatattctgatgtggttaccacc
accacccacaagagtctccgagggccaagatctggtatgatcttctacaggaagggcctg
aagcctcccaagaaaggccagcctgagggcgctctgtatgactacgaggacaggatcaac
ttcgcagtgtttccgtcgctccaagggggccctcacaaccaccaaattgctgcgctagcg
gttggtttgaagcagactatgtcacctggattcaagtcttatattaagcaggtcaaggcc
aatgctgttgcccttggtaaccatttgatgagtaagggctacaaattggttactgacgga
acagagaaccatcttgttctctgggatctgcgccctcttggcttgactggtaacaaagtt
gagaaggtctgtgatttgtgcagcattacactgaacaaaaatgctgtctttggggatagc
agtgcaatgtcacctggtggtgtccgcattggtacacctgccatgacatcaaggggtttg
gtagaggaggactttgtacagatcgccgagttccttcaccaggcagtgaccatctgcttg
gatgttcagaaggagcgtggcaagcttctcaagtacttcaacgagggcctggagaacaac
aaggacattgaggacctcagggcggaggtggagaagtttgccacttcattcgagatgcct
ggcttcagggtatccgacatgaagtacaaggattag

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