KEGG   Oryza sativa japonica (Japanese rice): 4352115
Entry
4352115           CDS       T01015                                 
Name
(RefSeq) protein transport protein SEC24 B
  KO
K14007  protein transport protein SEC24
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4352115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4352115
Membrane trafficking [BR:osa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    4352115
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 4352115
NCBI-ProteinID: XP_015620293
LinkDB
Position
12:complement(join(14243958..14244064,14244152..14244183,14244262..14244350,14244509..14244688,14244770..14244915,14245006..14245170,14245725..14245863,14246616..14246693,14247194..14247262,14247346..14247465,14248332..14248415,14248501..14248572,14248744..14248820,14250618..14250672,14250859..14250951,14251100..14251177,14251818..14251898,14253861..14253980,14254208..14254335,14254699..14254810,14255259..14255357,14255458..14255532,14255639..14255860,14256717..14257574))
AA seq 1092 aa
MASPSRPPPPFAPQNPTPAPNPAASSLPASFSNLHVSRAPPPFAPPGGNGPVPSSIRAPQ
APPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPGVMPSQPLQQQQQQQRPAF
GGPPSGAPPAQAQRTPFGGPPSAMSQGPLPFGGPPAAVASQPPPFGGPPVAAAQPPPFGR
PPSAAAAGQSAPLGGALFAAAQPPPFGGPPGAAPQPAPTGGLRTPYGGPPAPSQQVPFGG
APQWPGTQPPPFGAQAAPSSQPPPFMGVPGNAPPFRPPGWQGQARPGAMSAGMQLMPGGM
LPNALGQGMPSTPSMPYSPHAGAQVSTPSKIDPNQIPRPMPETSVVIFETRQGGQAAVPP
AASSEFIVKDTGNCNPRLMRCTLNQIPCTGDILTTSAMPLALMVQPFALPHPSEEPIQLV
DFGGMGPIRCSRCKAYINPFMRFIDQGKHFVCNLCGFSNDTPREYLCNLGPDGRRRDADD
RPELCRGTVEFIASKEFLVRDPMPAVYFFLIDVSMNAIQTGATAAACSAISQALSDLPEG
PRTMVGIATFDSAIHFYSLKRDQQQPLMLIVPDIQDVYTPLQTDLILLISECRENLEQLL
ESIPNMFENNRVADSAFGAAMKASFLAMKSTGGKLLVFQSVLPSVGIGSLSAREAEGRSN
ISTGDKEAHKLLQPVDKTLKTMALEFAEYQVCVDVFLTTQSYVDISSISVVPSTTGGRVY
HYYPFSALSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQDYSGNFCRRVPTDIDLP
AIDSDKTIMVTFKHDDKLQENSECAFQCALLYTTVYGQRRIRVINLSLSCTNVLSNLFRY
ADLETQFTYVVKQAANAIPSTPLSQVRDQVTSTCINILQSYRKHCASVSSSGQLILPEAL
KLLPLYTLALIKSVGLRTDGRLDDRSYWVSTVSSISVLLAIPLVFPRMIALHDLASRSDD
DSLIPNPLTLNSENTLDFGIYLLENGEDGFVYVGNAVNPATLEQIFGVSSLAGVPNQLVL
EQYDNELSRKVNEVVNEIRRQRCSYLRLRLCKHGDPSGDFFRSLLVEDKAPGGLSYVEFL
VHVHRQIQSKMT
NT seq 3279 nt   +upstreamnt  +downstreamnt
atggcgtcgccgtcgcggccgccgccgcccttcgcgccgcaaaaccctacccctgccccc
aacccggccgcttcctccctcccggcgtccttctcaaacctccacgtctcccgcgcgccc
ccgcccttcgcgccgcccggggggaatggccccgtgccctcgtcgatccgcgcgccgcag
gcaccgccccccggtgcgagaccgttccccgggagcccgcctcccccgtcgcagccgccg
ccgccgttcgcgcggcccgcggcgccggtgcagcagcaacctcctcccttcggtggcccg
cccggagtgatgccttcgcagccgctgcagcagcagcagcagcagcagcggcctgccttc
ggtggtccgccgtccggtgccccgcctgcgcaggcgcagcggacgcccttcggagggccg
ccctcggcgatgtcgcagggtccgctgccattcggtggcccgcccgcggcggtggcgtcg
cagcctcctcctttcggtggaccgcctgtggcggcggcgcagcctcccccatttggcagg
cctccgtctgcagcagcagcaggtcaatcggctccgctgggtggggctctgtttgcagcg
gcacagccacctccattcggcgggccacctggggcagcgccgcagccggcgcccactggt
gggttgaggacgccgtatggagggccaccggcgccatcgcagcaggttccgtttggtgga
gcaccacagtggccaggaacacagcctccgccttttggggctcaggctgcgccgtcgtcc
cagccacctccgttcatgggggtgccagggaatgctccgccattcaggcctccgggttgg
caagggcaagcacgaccaggagctatgtctgctggtatgcagctaatgcctggcggcatg
ctgcccaatgctctaggacaagggatgccgtccacaccctcaatgccatattctccacat
gctggagcccaggtctctaccccatccaaaattgatcctaatcaaataccacgtccaatg
cctgagacgtcagttgtcatttttgagacccggcaaggtggccaagcagctgttccaccg
gctgcgtccagtgaatttattgtcaaggatacaggtaactgcaatccacgtttgatgcgg
tgcaccttaaatcagataccatgtacaggagatatcttgacaacatcagcaatgccattg
gccttgatggtgcaaccttttgcacttcctcatccttccgaggagcctatccagcttgtg
gacttcggagggatgggacctattaggtgttcacgctgcaaagcatacataaatcctttc
atgcgattcattgatcaagggaagcattttgtctgtaacttatgtgggtttagcaatgat
actccaagggagtacttgtgcaacttaggtcctgatggtaggcgacgcgatgctgatgac
aggcctgaattatgtaggggaacagttgaattcattgcctccaaggaatttctggttcgt
gatccaatgccagctgtgtattttttcctcattgatgtctccatgaatgccatacagact
ggtgcaacagctgcagcttgcagtgcaatttcccaggctctttcggaccttcctgaaggt
cctcgaacaatggttgggattgccacatttgattccgctattcatttctacagtcttaaa
cgtgatcagcaacagcctttgatgcttattgttccagacatccaagatgtgtacactcca
cttcagactgacctgattctcctgatttctgagtgccgtgagaatttggagcaattactg
gagagcatccctaacatgttcgagaacaatagggtcgctgattcagcatttggggcagct
atgaaggccagtttccttgctatgaagtctactggtggaaaactactcgtgttccagtca
gtactaccatcagttggaattggttcattatctgccagggaagctgaaggtagatcaaat
atttccactggagataaggaagcacataagctcctgcagcctgttgataagactctgaag
acgatggcactagaatttgcagagtatcaagtttgtgtggatgtgttccttactacacaa
tcatatgtagatatttcttctatatcagttgttcctagtaccactggtggccgggtgtac
cattattatccattttctgccctttctgatccagccaagctgttcaatgatctcagatgg
aatatcagtagaccccagggatttgaggctgtcatgcgtgtgaggtgcagtcaaggactt
caagttcaagactattctggcaacttctgccggcgtgttcctactgatattgatctccct
gcgattgactcggacaaaaccataatggtcacctttaagcatgatgacaaattgcaggag
aattcagaatgtgctttccagtgtgcacttctttacacgacggtatatggacaaagaagg
atacgggtcataaacctctcactttcatgcacaaatgtgctcagcaaccttttccgatat
gctgatctggaaacacagtttacctatgttgtgaagcaagccgcaaatgccattccatca
acacctctatcccaagttagggaccaagtgacgagcacatgcatcaatatactccagtct
taccgaaaacattgtgcatctgtaagttcttcgggacaattgattcttcctgaggctcta
aagctcctgcctttgtatacgctagcattaattaaaagtgttggattgaggactgatggg
agattggatgatcggtcctattgggtgtcaactgtctcttcaatttctgtgttactagcc
attccattggtgttccctaggatgattgccctccatgatcttgcgtcaaggagtgatgat
gattcccttataccaaacccccttacactcaatagtgagaatacgcttgattttggaatt
tatttgttggaaaatggtgaggatggttttgtttatgtcggaaatgcagtaaaccctgcc
acccttgagcaaatatttggtgtttcatctttggctggagtaccaaatcagttggtattg
gagcaatatgataacgaactttccaggaaagtaaatgaagtggtgaatgaaataaggcga
cagagatgctcctatttgagattgagactatgcaaacatggggacccatctggagatttc
ttccgctcactattggtcgaagacaaggcacctggtggcctttcttatgtagagttcctt
gtacatgttcataggcaaatccaaagcaagatgacctga

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