Oryza sativa japonica (Japanese rice): 4352229
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Entry
4352229 CDS
T01015
Symbol
CYCT1-1, cycT1
Name
(RefSeq) cyclin-T1-4
KO
K15188
cyclin T
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4352229 (CYCT1-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4352229 (CYCT1-1)
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
4352229 (CYCT1-1)
Brd4/P-TEFb complex
4352229 (CYCT1-1)
7SK RNP complex
4352229 (CYCT1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
RE_TaqI
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
4352229
NCBI-ProteinID:
NP_001410437
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All DBs
Position
12:join(18443541..18443776,18444308..18444389,18446031..18446165,18446826..18447001,18447085..18447236,18449161..18450011)
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AA seq
543 aa
AA seq
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MAMMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKES
YLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVE
ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH
PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL
PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPSHGNEAEGSSASVPNQRVSV
KSEETPLPHQSKQSSSQHSTGAPSHHGVEHSNLEKQTVDQKMLQNDNGDHGSNKTRSNQS
GSRVDFGANDGLHHDKQSMTENKNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKV
KAQMEKQRKLKGDVARKVEVIDDDDDLERQLEHDIELAVEDNKIKQERKQSSPHVMHRGD
HRNADQVTGNGHLGKQNTPETAQDAPMDDIKEQRNSHGSKHHDSHDTAHERGERDYKRPR
PEG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgccaagtgattcatcacatcatggaattgtagaaaatagcccatacaga
actacccagggcaggaatgaggagactggtgaacttggtgcttcatggtatttcagtaga
aaggaaatagaagagaattctccatccaggagggatggcattgatttgaagaaagagtct
tacctccgaaaatcatattgtacttttctacaagatttgggcatgaggcttaaagtgcca
caagtcactattgctacagctattgtgttctgtcaccgtttttaccttcgtcagtcccat
gcaaaaaatgatagacgaacaattgccacagtttgcatgttcttggctggaaaagttgaa
gagacgcctaggcctttgaaagatgttattctggtttcttatgagattattcataaaaag
gatcctgctgctggtcagagaatcaagcagaaggaagtatatgatcaacaaaaagaactt
attttacttgcggagcgagttgtacttgcaactcttgggtttgatttgaatgtgcatcat
ccatacaagcctttggttgaagcaataagaaaatttaaagttgctcaaaatgcgcttgct
caggttgcatggaattttgtcaatgatgggctgcgtacttcgctttgcctgcagttcaag
cctcatcatattgcagcaggtgctatctttttggctgctaaatttctcaaagtgaagctt
ccatctgatggtgagaaggtttggtggcaggagtttgatgtgactccaagacagctggaa
gaagttagcaatcaaatgttggagctgtatgagcaaaactgtgcagcacaggcacaaccg
tcccatggaaatgaagctgaagggagctctgctagtgttcctaatcagcgagtctctgta
aaatccgaggaaacacctcttcctcaccagtcgaaacagtcaagttcacagcattcaaca
ggtgctccaagtcatcatggtgtcgagcactcaaatctagaaaagcaaactgtggaccag
aaaatgcttcaaaatgacaatggtgaccatgggagcaacaaaacaagaagcaatcagagt
ggaagtagagttgattttggtgccaacgatggtttacatcatgacaaacagtccatgaca
gaaaataagaatcttccatcacatggcaactccagtgaaatcagagatgtcaaccgcaat
ggcaatgatggtacgaatgtgacatccttgatggtaaataaaattgacaaggataaggtg
aaagcacaaatggaaaagcaaaggaaactgaaaggtgatgttgctaggaaggtagaggta
atagatgatgatgatgatcttgagaggcaactagaacatgacattgaattggctgttgag
gataataagataaagcaggagaggaagcagagttcccctcatgttatgcatcggggggat
catagaaatgctgatcaagttacaggcaatgggcaccttggcaagcagaatacaccagag
actgctcaagatgccccaatggacgacattaaagaacagcgcaattcccatggctcaaag
caccatgacagtcatgatactgctcatgagcgaggtgaaagagactataaaaggcctcgg
cctgaaggttag
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