Oryza sativa japonica (Japanese rice): 4352271
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Entry
4352271 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4352271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4352271
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
4352271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Motif
Other DBs
NCBI-GeneID:
4352271
NCBI-ProteinID:
XP_015618464
UniProt:
Q2QQB3
A0A8J8Y734
LinkDB
All DBs
Position
12:join(19544128..19544130,19544236..19544310,19544454..19544528,19544642..19544714,19544953..19544997,19545634..19545745,19546211..19546283,19546595..19546639,19547633..19547688,19547787..19547962,19548706..19548893)
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AA seq
306 aa
AA seq
DB search
MNYIVGAFKPPCDISIAFSDARSRKQIAVKNDNGRTVMVPVFQSLETISGEVSVVPVPGK
RIEHLGVKIELLGQIELYLERGKFYDFTSLVRELDIPGEIYEKKTYPFEFSTVEMPYESY
NGTNVRLRYILKVTISRNIMGMGSIVEFREFCVRNYSPAPTINNSIKMEVGIEDCLHIEF
EYSKSKYHLKDVIIGKIYFLLVRIKIKNMELEVRRRESTGAGSSAYVETETLAKFELMDG
APVRGESIPVRLFLTPYELTPSYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYRLL
ETPQAS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatcgtcggagcgttcaagccgccctgcgacatctccatcgccttctccgac
gccaggtcgcggaagcagatcgcggtcaagaatgacaatgggaggacggtgatggtgccg
gtcttccagagcctggagaccatatccggggaggtgtcggtagtgccggttccgggcaag
aggatcgagcacttgggtgtcaagattgagttactgggtcagatagagctttatttggag
cgaggcaaattctatgacttcacttcattggtgcgtgagctagatattcctggtgaaatt
tacgagaagaaaacatatccattcgagttttccactgttgaaatgccttatgaatcttac
aatggaacaaatgtcagattaagatatattttgaaggttacgatcagccgaaacattatg
ggcatgggcagcattgtggagttccgtgagttctgtgtaagaaattactctcctgccccc
acaatcaacaacagtatcaagatggaagttggaattgaggattgcttacatattgagttc
gaatacagcaaaagcaagtaccatctcaaggatgtgattattgggaagatctactttctt
cttgtcagaataaagataaaaaacatggaactagaagtacgtcgtagggaatcaacagga
gcaggctctagtgcatatgttgagactgaaactcttgcaaagtttgagttgatggatggt
gctcctgtcagaggagaatccatcccggtgaggctattcttgacgccttacgagctgacc
ccttcgtatcggaacataaacaacaagttcagcgtcaagtactacctgaatctggtcctt
gttgatgaggaagataggaggtacttcaagcagcaagagatcaccatgtatcgccttcta
gaaaccccccaggcttcctag
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