KEGG T01015: 4352279

Oryza sativa japonica (Japanese rice): 4352279

Entry

4352279           CDS       T01015

Name

(RefSeq) glycine-rich RNA-binding protein blt801

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4352279
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4352279
   03041 Spliceosome [BR:osa03041]
    4352279
Messenger RNA biogenesis [BR:osa03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4352279
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4352279
Spliceosome [BR:osa03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    4352279

SSDB

Motif

Pfam:

RRM_1 RRM_7 RRM_occluded RRM_RdRP1_2

Other DBs

NCBI-GeneID:

4352279

NCBI-ProteinID:

XP_015619866

UniProt:

B7ENV9 Q2QQ97

LinkDB

Position

12:join(19620230..19620338,19620438..19620506,19620586..19620692,19621292..19621783)

AA seq 258 aa
MALANKIGNLLKRATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEA
KIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANERTGGFRSGGGG
YGGGGYGGGGGGYGGGGYSGGGGYGGGGYSGGGGGGGGYQGGGGGYGGNNGGYGNRGGGG
GGYGVAEGSADAFSGINLGGDGSFGGNPAGSFGDAGGSTGGGDFSGAGGDSFGSRKNDEL
MDDLFKDDEPDNYANKQG

NT seq 777 nt +upstreamnt +downstreamnt
atggcgttggctaataagattggtaatctgctcaagagagccacgagctcaagtccagct
ctctatcaatcaatcagatgcatgtcatcctcaaagctttttgttggaggcctttcgtac
ggcacagatgagcagagcctcagagatacttttgccaattatggtcaagttattgaagct
aagatcatcaatgaccgtgaaactgggaggtctagaggttttggcttcataacttacgca
tcaagtgaagaggcttcagctgcaatcacagccttggatggaaaggatctcgatgggcgt
aacatcagggttaacactgccaatgagagaactggtggcttccgtagtgggggtggtggc
tatggaggcggtggctatggcggcggcggtggcggctatggtggtggtggctacagtggt
ggtggtggctatggcggtggtggctacagtggtggtggtggtggcggcggcggctaccaa
ggaggcggcggtggttatggtggcaacaatggagggtatggcaacaggggtggtggtgga
ggtggttatggagttgcagaaggatctgcagatgccttctctggaatcaacttaggtggt
gatggtagttttggtggaaacccagctggaagctttggtgatgctggaggttccactggc
ggtggtgatttctccggtgccggtggtgacagctttggaagccgcaagaacgatgagctc
atggatgacctcttcaaggatgacgagcctgacaactatgccaacaagcagggctaa

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