Oryza sativa japonica (Japanese rice): 4352544
Help
Entry
4352544 CDS
T01015
Name
(RefSeq) protein NPG1
KO
K21843
tetratricopeptide repeat protein 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4352544
Membrane trafficking [BR:
osa04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
4352544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_19
TPR_1
TPR_11
TTC7_N
TPR_CcmH_CycH
ARM_TT21_2nd
TPR_9
Ycf2
Imm58
AATF-Che1
TPR_17
Motif
Other DBs
NCBI-GeneID:
4352544
NCBI-ProteinID:
XP_015620266
UniProt:
Q2QNH6
Q0IMJ9
LinkDB
All DBs
Position
12:complement(join(23886482..23886798,23886963..23887110,23887393..23888603,23888680..23888935,23890114..23890362))
Genome browser
AA seq
726 aa
AA seq
DB search
MAAAMAESDNNGSEVSPGGGGRDSASAAAAVASPVKAKARALLELETASAAAAASESSEA
RVDDGNIQEAESSLREGLSLNYEEARALLGRLEYQRGNVEAALRVFDGIDLQAAIQRFQP
SLSEKPPSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMSLQKLGKAVEAAQQCRSVLDA
VESIFQRGIPDVMVEQKLQETVSKSVELLPELWKQAGAYQEALASYRRALLSQWNLDDDC
CTRIQKRFAVFLLYGGVEASPPSLASQTEGSYVPKNNLEEAILLLMIILKKWYLGKTHWD
PSVMEHLTFALSLCGQTSVLAKHLEEVLPGIYPRTGRWYSLALCNYAASHNEAALNLLRK
LLNKNESPGDIMALLLAAKLCSSDYSLASEGVEYARRAVTNVDSSDGHLKSAALHFLGSC
LAKKSRIATSDHQRSLLQTESLKSLSEAISLDRHNPDLIYDMGIEYAEQRNMQAALKCAK
EFIDATGGSVSKGWRLLSLVLSAQQRYSEAEVVTDAALDETTKWEQGPLLRIKAKLKVAQ
SLPMEAVEAYRALLALVQAQRKAYGTVKNGTEEVDNKVSEFEVWQGLANLYASLSYWRDA
EICLQKAKALKSFSAITLHAEGYTREVREQTQDALAAYFNAVSTEVEHVPSKVSIGALLS
KQGPKYLPVARSFLSDALRHEPTNRMAWFYLGKVHKHDGRLADAADCFQAASMLEESDPI
ESFRSL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcgatggcggagtcggataataacggcagcgaggtcagccccggcggcggc
gggagggactcggcgtcggcggcggcggcggtagcttcgccggtgaaggcgaaggcgagg
gcgttgctggagctggagacggccagcgcggcggcggcggcgtcggagtcgtcggaggcg
agggtcgacgacggcaacatccaggaggccgagtcgtcgctccgcgagggcctctccctc
aactacgaggaagcgagggctctcctagggagactggaataccagagaggcaatgtagaa
gctgcactgcgagtatttgatgggatagatcttcaagctgctatccagcgctttcaacca
tcgctttcagaaaagccaccctcaaaacgaagtaacaaattacgttcagattcatcgaat
tcaggatcgcagcatgctgccagtcttgttcttgaagccatttacttgaagtcaatgtct
cttcagaagttagggaaagcagtggaggctgctcaacagtgtagaagtgtccttgatgct
gttgaaagtattttccaacgtggcatacccgatgtcatggttgaacaaaagcttcaggaa
accgttagtaaatctgtcgagcttctcccagaactttggaagcaagctggagcctatcaa
gaggcgctcgcttcttaccggcgtgctcttcttagtcagtggaatctcgatgatgactgc
tgcacaaggattcagaagagatttgctgtttttctgttgtatggtggcgtagaggctagc
cccccaagcttggcttcacaaactgaaggatcatatgttcctaagaataacttggaagag
gcaatccttttgctcatgataatattgaaaaagtggtaccttgggaagactcactgggat
ccatcagtgatggagcatctaacatttgcattgtcactttgtggtcagacatctgttctt
gccaagcatcttgaagaggttttacctggaatataccctcgaactggaagatggtatagt
ctagctctttgcaattatgcagcttcacataatgaagctgcattaaatttgttaaggaag
ttgttgaataagaacgagagtcctggtgacataatggccctcctgttagctgctaagtta
tgcagctcagattattctcttgcttctgaaggagtagagtatgcaagaagagctgttaca
aatgttgattcatcagatggtcatttaaagagcgctgcgctccacttcttggggagttgc
ctggctaagaagtctagaatcgctacatctgatcaccaaagatctctcttgcagactgag
tctttgaagtcacttagtgaagcgatttctcttgatcgtcacaacccagatttaatatat
gacatgggtattgaatatgctgagcaacgaaacatgcaggctgctttgaaatgtgcaaag
gagttcattgatgcaactggtgggtctgtttctaaaggttggagattgctatctttggtt
ctttctgcacaacaaaggtattcagaagcagaggtggtgactgatgctgcattagatgaa
actacaaagtgggaacaagggccattacttagaataaaggctaaactgaaggttgctcaa
tcgttgccaatggaagcagttgaagcataccgtgcccttcttgctcttgttcaggcacaa
cgaaaggcttatggtaccgtaaaaaatggcacagaggaggttgataataaagtgagcgag
tttgaagtttggcaaggtcttgccaacttgtatgctagtctttcctattggagagacgcc
gagatatgtttacagaaggctaaagccctcaaatcattctcggccataacgcttcatgca
gaaggttacacgcgtgaggtgcgtgagcagacacaggacgcactggctgcatacttcaat
gcggtctcgaccgaggtggagcacgtaccatcaaaggtatccatcggcgccctcctgtcc
aaacaaggccccaagtatctccccgtcgcaaggagcttcctctcggacgccctaaggcac
gagccgacgaaccggatggcatggttctacctagggaaggtccacaagcatgatggcagg
ctagctgatgctgctgactgcttccaggcagcctcaatgcttgaggaatcagacccaata
gaaagcttcagatcactctga
DBGET
integrated database retrieval system
