Oryza sativa japonica (Japanese rice): 4352575
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Entry
4352575 CDS
T01015
Symbol
SPL11
Name
(RefSeq) E3 ubiquitin-protein ligase SPL11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4352575 (SPL11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4352575 (SPL11)
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4352575 (SPL11)
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
U-box type E3
4352575 (SPL11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-C3HC4_4
zf-Nse
HEAT_EZ
Arm_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
4352575
NCBI-ProteinID:
NP_001410517
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All DBs
Position
12:complement(join(24158596..24159792,24159888..24160322,24160417..24160512))
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AA seq
575 aa
AA seq
DB search
MKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLLS
VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGEHIERMSMLL
KKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYE
RACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTP
ACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLS
SSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSV
IDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMG
LVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLH
LCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQS
QASAQVPPQATPEQVPENDIPEQLDSPASQYPMVV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttcagggagtaattttgcagctggaacaagctctgtgcgacattccgtac
aatgaattggatatatcagatgaagttagagagcaggttgagttagtgcacgcacagctc
aaaagagcaaaagaacggattgatatgcctgacgatgaattctacaatgatctactatct
gtatatgacaagaactatgacccaagtgcagaactggctattcttggaagattgtcagaa
aagctacacttgatgacaatcaccgatctcacgcaagaatcactcgccttacatgagatg
gtcgcatccggcggtggtcaggacccaggagaacacattgagagaatgtcaatgctactg
aagaagattaaggattttgtgcaaacacagaaccctgacatggggcctcctatggcttcc
agggtattggattcaaatggggattcaaggcctataaccattcctgacgagttccgatgt
ccaatttctcttgagctgatgaaggatcctgttatagtgtctacagggcagacatatgag
cgggcatgcattgagaaatggatagcatcaggccatcatacctgcccaaccacgcaacag
aagatgtcaacctcagcattgacgccaaactatgtccttagaagtctcatttcccagtgg
tgtgaaaccaatgggatggagccaccaaagcgctcaacccagcctaacaagcctacgcct
gcatgctcttcgagtgaacgtgctaacatcgatgctctgctatctaagttatgctctcca
gacactgaggagcagagatcagctgctgcagagcttcgcctccttgcaaagcggaatgca
aacaaccggatttgcattgctgaggcaggtgccattcccttgctattgagtctgctgtcc
tcatctgacctacggactcaagaacatgcagttactgcccttctgaacctctccatacat
gaggacaataaggcaagcatcatatcatctggtgctgtcccaagcatagtccatgttctg
aagaatggcagcatggaggcacgggagaatgctgcggccacactttttagtctctcagtg
attgatgaatataaagtgacaattggagggatgggggctatccctgcgcttgtagtgctg
ttaggcgagggtagccagcgggggaagaaggatgcagcagcagctctcttcaacttgtgt
atataccaagggaacaagggacgagcgattcgagctggccttgtgccactcatcatgggg
ctggtgaccaaccccacaggagcgctcatggatgaggctatggcaatactctccatacta
tccagccaccctgagggcaaggcagcgattggggcggcagagcctgtccctgtgcttgtg
gagatgatcggaagcggaaccccgagaaatcgagagaatgctgcggctgtcatgctacat
ctgtgcagtggagagcaccatcttgtgcatttagctcgtgcgcaggagtgcgggatcatg
gtcccgttgcgggagctggctttgaacggcaccgatagggggaagaggaaggctgtgcag
ctgctcgagcggatgagcagattcctagtccagcaacaagaggaacaggagtcccagtcg
caagcctccgcgcaggtccctcctcaggccacccctgagcaggtcccggaaaatgacatc
cctgaacaattggacagcccagcgtctcaataccctatggttgtatga
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integrated database retrieval system
