Oryza sativa japonica (Japanese rice): 4352626
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Entry
4352626 CDS
T01015
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00531
Glycosaminoglycan degradation
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
4352626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
osa00536
]
4352626
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
4352626
Glycosaminoglycan binding proteins [BR:
osa00536
]
Heparan sulfate / Heparin
Enzymes
4352626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
4352626
NCBI-ProteinID:
XP_015620710
UniProt:
Q2QN56
Q0IMC4
LinkDB
All DBs
Position
12:join(24642894..24643103,24643200..24643236,24643650..24643833,24643996..24644144,24644248..24644478,24644583..24644772,24644857..24644982,24645067..24645166,24645391..24645783)
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AA seq
539 aa
AA seq
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MRLWFLIPLLLCFPTLIRSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNYDQC
PWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTPFSKSSSGL
FGFSQGCITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEY
TVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGF
YDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTI
QRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNY
GLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLN
KNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQD
GNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCER
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaggctatggtttctcatacctcttcttctctgtttccctacattgattcgatccgag
gattactcggatgtgaccatcgtcgttcggggtgctgagacgatcgcttcgaccagcaac
gagttcatttgcgccaccattgattggtggcctccagagaagtgcaattatgaccagtgt
ccatgggggcaagcttctatcttaaatttggacttgactaatcctttgctagctaaagct
atccaagcctttagccctctacgtatcagacttggaggttccttacaagatcaggtggtg
tatggcacgccgaatttaggatctccatgcaccccattttcaaagagttcaagtggcctg
tttggattttctcaaggatgcataaccatggaaagatgggatgctattaataagatcttt
atggatacaggtgcagttgttacattcggccttaacgcgcttcaagggcgacagcagatg
ggcagaggtgtttggggaggtgcttggaattccagtaatgctcgggagttcatggagtac
actgtttcgatgaactaccctatagactcatgggaatttggtaatgagttgagtggaagt
ggaattggtgcaagtgttggagctgaacaatatggaaaagatataattgagctcaagaac
atcatcagccagttatatggaaactctaggaaaccattggtggttgccccaggaggattc
tatgaccaaaaatggtatgctcagcttcttgatatctctggtccaaatgttctcgacaca
atgactcatcatatttacaatcttggtgctggtaacgatccgcaagttgcaaataggatc
ttgaatccgcagtatttgagccagagctctgatacattcagagatctccaaatgacgata
cagcggcatggaccatggtctgctccctgggttggggaagctggtggtgcatataacagt
ggcagccgaaaagtgtctaatactttcctgaatagcttctggtatcttgatcagcttggt
cagtcagcaaagtatgacacaaaggtttactgcagacagactttgattggaggcaactat
ggccttcttgataccgaaacttttgttccaaaccctgattactacagtgccttgctgtgg
catcggctcatggggaagggagttatttccttagacaccagcggttcttcgtacttgcgt
gcctatgcgcattgcggaaagcaaaagggcggcgtcgcgctcctcatgctcaacctgaac
aagaacatgggattcatggtctcagtcagaaatgacctcaacattaatttcagagaaatg
gcagggataaagagggacaactcctttgtccatggcctgaagaggacagtctcctgggtt
gggagcaaagcctcggatgggctggagaagagggaggagtaccatctgactccacaggat
ggcaacccttttgccaggacagtgctgctcaatggagctcctcttcagctcactggagat
ggtgacatcccttcactgccaccagtgatggtctcagtcaattccccaatctatgtcgcc
ccgctgtcgatcgcgttcgtcgtcttcccagatttcgaggctgaaggttgcgaacgatga
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