Oryza sativa japonica (Japanese rice): 4352647
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Entry
4352647 CDS
T01015
Name
(RefSeq) CSC1-like protein HYP1
KO
K21989
calcium permeable stress-gated cation channel
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4352647
Transporters [BR:
osa02000
]
Other transporters
Pores ion channels [TC:
1
]
4352647
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
CNP_C_terminal
Motif
Other DBs
NCBI-GeneID:
4352647
NCBI-ProteinID:
XP_015620639
UniProt:
Q2QN15
A0A8J8YRB9
LinkDB
All DBs
Position
12:join(24902773..24903008,24903116..24903271,24903980..24904043,24904331..24904540,24905271..24905459,24905637..24905935,24906168..24906444,24906638..24906910,24907909..24908142,24908300..24908449)
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AA seq
695 aa
AA seq
DB search
MILSALATSVGINLGLTVLLAAAYTLLRRRPPYVAVYSPRRPYAPPEPWLPAAWRRTEAD
VHAAAGLDGVVFLRIFVFSIRVFAAAAVVGVGVLMPVNFMGDQLRQIDFSDLPNKSVDLF
SVSNVQDGSNKLWLHFSAVYIITGITCYLLYYEYKYISGKRLEYFMTSKPLPQHFTVLVR
AIPVTNGVSVSDAVDKFFKEYHSSTYLSHTVVHQTGKLRRLLNDAENICTKLANLKSVRR
TSGDPPGKFLGIFGRNDLVGKYQKRLEDLEENVRMEQSDTTRSRQEVPAAFVSFRSRYGA
ANAIYIRQSDKPTEWQTEHAPDPHDVYWPFFSTSFMDRWISKFVVSVASILLILVFLLVS
AFVQGLTYMEQLETWLPFLRNILEIAVVSQLVTGYLPSVILHFLSSYVPSIMKLFSTMQG
FISVSGIERSACNKMLRFTIWSVFFANVLTGSVLGQLEIFLDPKEIPKRLAVVVPAQASF
FITYVVTSWTSIASELTQTAALLFHLWGSCAKCCKRDESKPPSMHYHSEIPRVLLFGLLG
LTYFIVSPLILPFVLVYFCLGYFIYRNQLFNVYSPKYDTGGRFWPIVHGGTIFSLVLMHV
IAIGVFGLKKLPLASSLLVPLPVLTLLFNEYCRNRFLPIFEAYSTESLIKKDREEESKPE
MAEFFSNLVNAYCDPAMKPIQHSSNSDERTTPLLS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtcggcgctcgcgacttcggtggggatcaacctggggctgacggtgctcctc
gcggcggcgtacacgctgctccggcggcgcccgccgtacgtcgccgtgtactcgccgcgg
cggccgtacgcgccgccggagccgtggctgcccgcggcgtggcgccgcaccgaggccgac
gtccacgccgccgccgggctcgacggcgtcgtcttcctccgcatcttcgtcttcagcatt
agggtgttcgcggcggcggcggtggtgggggtgggagtgctgatgccggtgaacttcatg
ggggaccagctgcggcagattgacttctccgatctgcccaacaagtccgtcgatctcttc
agcgtctccaacgtgcaggatggctccaacaaattgtggctccacttttcggctgtgtac
atcataactggaattacatgctacctcctttattatgaatacaaatatatttctggcaag
aggctcgaatattttatgacatcaaaaccactacctcagcatttcacagttctagttcga
gctatacctgtaaccaatggtgtgtctgtgagtgatgctgttgataagttcttcaaagag
taccattcatctacctacttgtcacacactgttgttcatcaaactggcaaactccgccgc
cttcttaatgacgctgagaatatttgcacaaagcttgccaacttgaagtctgtacggcgt
acttctggagatcctccaggaaaatttcttggaatatttggcagaaatgatcttgttggg
aaatatcagaaaaggctggaggacctagaagaaaatgttagaatggaacaatcagacact
actaggagcagacaggaagttcccgctgcttttgtgtcattcagatctcgatatggtgct
gcaaatgctatttacataagacaatcagacaagcctactgagtggcagactgagcatgct
cctgatccccatgacgtttattggcctttcttttcaacatcattcatggacagatggata
tccaagtttgtagtctctgtagcttctattctcctgatactcgtctttctcctagtttcg
gcatttgttcaaggactcacctatatggaacagctagagacatggttgcctttcctgaga
aatatactggaaatagctgttgtcagtcagttggttacaggatatcttcccagtgtcatt
cttcactttctttcctcttatgtgccctctataatgaagctgttttcaacaatgcaagga
ttcatctctgttagtgggattgagagaagtgcttgcaacaaaatgcttcggtttacaata
tggagtgtgttctttgcaaatgttcttactggctcagtacttggtcaactcgagatattc
cttgatccgaaggaaatccctaaaaggcttgcagttgttgtaccagcacaggcctctttc
tttattacatatgttgtgacatcttggacaagtatagcatcagaacttactcaaactgct
gcccttttattccatttgtggggtagctgtgcaaaatgctgcaagagggatgagtccaaa
cctccatcaatgcattaccatagtgaaattcctcgggttctcctgtttggacttcttggg
ctcacatacttcattgtatccccacttatcctcccatttgtactggtttacttctgcctt
ggctacttcatatatcgtaatcagctttttaatgtatattcacccaagtatgacactggt
ggaagattctggcccattgtgcacgggggaacaatattttctctggtgctgatgcatgtt
attgcaattggagtatttggattgaagaaacttccccttgcatcaagtttgctggtacct
cttccagtgctgacccttctgttcaatgaatactgccggaacagatttttaccgatcttc
gaagcatattctactgagtcattgataaagaaagacagagaagaagagagcaaaccagaa
atggcagaattcttcagcaatcttgtaaatgcgtactgtgacccggcgatgaaacctatc
caacactcctcgaattcagatgaacgcactacacctctattgtcttag
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