Oryza sativa japonica (Japanese rice): 4352707
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Entry
4352707 CDS
T01015
Name
(RefSeq) flowering locus K homology domain-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4352707
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
4352707
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_N4BP1_2nd
RemA-like
NIL
Motif
Other DBs
NCBI-GeneID:
4352707
NCBI-ProteinID:
NP_001410538
LinkDB
All DBs
Position
12:join(25804912..25805394,25808011..25808257,25808920..25809068,25809154..25809441,25809551..25809739,25810258..25810455)
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AA seq
517 aa
AA seq
DB search
MDGNIENPAEDMSGIASNLDNEEQAIPLSDVPEQYKEDPENTYDEETKDSSYEESGIPYN
EDQVNINDGNVGHQHEEDQAIPSEEGHAYGGEAQGEQQANAVTDEKKWPGWPGESVFRIL
VPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAPLPPAVDG
LLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVL
RILESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEMQMKVHNAH
REQPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPPRPQDHYYPPPDVPPVEKQPHY
GISSYGRDAPPTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGAAGASISYIRRHSG
ATISIQEGVPGEMTVEISGSASQVQTAQQLIKNFMAEASPQGPPQAPAPPAQPVDTGYSS
YPPYGGTSYGSPPGGAGPHNGGSYGGAPPPYPPSYGY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaacatcgagaatcctgcggaggacatgagtgggattgccagtaatcttgat
aatgaggagcaggcgattcctctcagtgatgtgcctgagcagtacaaggaagatccagaa
aatacatatgacgaagaaaccaaagactcaagctatgaagaatcagggatcccatacaat
gaagatcaggtgaacataaatgatggaaatgtggggcatcagcatgaagaggaccaagct
atcccctcagaagaagggcatgcctatggtggagaagctcagggagagcagcaggccaat
gcagtaactgatgagaagaaatggccaggttggcctggagaaagtgtgttccgtatactt
gttccagcccaaaaagtgggcgctgtcattggccgaaaaggggagtttatcaagaaaatg
tgtgaggagtccagagctcgcataaaggtgcttgatggaccaccaggggtaccagataga
gcagtaatgatttcagcaaaagatgaaccagatgcaccattacctcctgctgttgatgga
ttgcttagagttcacaagcggataacagatggtttagatggtgaatctgatcaacctcaa
cgtgctgctggtactgtagggccaacacggctactggtgccagcttctcaagctggcagc
ctgattggcaagcaaggagcaaccattaaatccatacaggatgcttctaagtgtgttctc
cgaattcttgaaagtgtaccacctgttgcattaagtgacgaccgagttgttgagatacaa
ggtgaacctctagatgtccacaaagcagtggaactgattgcaagtcatttaagaaaattt
cttgttgaccgcagtgtgctccctttgttcgaaatgcagatgaaagtgcacaatgcgcac
agagagcaacctatgccacctcctcagacgtggggtcctcctccaccgtggggtcatcca
tcaaacgttcctcctggtggcccaggttatggtggtaatccacagttcatgcctcctcgg
cctcaagaccactattatcctcctcctgatgtacctcctgtcgaaaagcaaccacactat
ggaatttcttcatatggccgtgatgcacctcctactggtgctcctcctgcctcagggaat
caacacccaccacatggttcttctcaaataacacacagcatgcaagttcctctttcctac
gctgatgccgtgattggggcagctggtgctagtatcagctacattcgcaggcatagtggt
gcaacaataagtattcaggaaggtgttcctggagaaatgactgtggagatatcaggaagt
gcttcacaagttcaaactgcccagcaactgatcaagaatttcatggctgaagcttctccc
caaggccccccacaagctcctgctcctcctgctcaaccagtcgacacgggctacagctcc
tacccaccgtacggaggaacatcatacggatctcctcctggcggcgcaggtcctcacaac
ggtggaagctatggcggtgcgccacccccctaccctccgagctacggatactag
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