Oryza sativa japonica (Japanese rice): 4352811
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Entry
4352811 CDS
T01015
Name
(RefSeq) nuclear transcription factor Y subunit A-10
KO
K08064
nuclear transcription factor Y, alpha
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4352811
Transcription factors [BR:
osa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
4352811
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GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
4352811
NCBI-ProteinID:
XP_015618449
UniProt:
B9GEB4
Q2QM38
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All DBs
Position
12:complement(join(27064124..27064507,27064760..27064903,27065444..27065512,27065636..27065736,27066858..27067095))
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AA seq
311 aa
AA seq
DB search
MMSFNKSQEGFGQVAAVATLASNGGGSLPWLLYGEPLGQGKPAMSPEGVVPRAQTPLDPP
QVPAMDRGVPEILNFSMVPGKGEKCSEHSTTIALQSPFAEYNGCFELGLGQSVVPSNYPY
ADQHYGLLSPYGVRPTPSGRILIPPNMPADAPIYVNAKQCSAIIRRRHARAKAERENRLV
KARKPYLHESRHLHAMRRARGSGGRFLNTKKETNGKTTGGGRKVMDIIIPPLCPAASPSS
EQCNPSSVSSLSGSEVSSIYEHEDMDHFHSFDHLRTHFFTPLPSLMDVEHGAGNPFKWTA
ASDGCCDLLKA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttcaacaagagccaagaaggatttgggcaggttgctgctgtggccaccctg
gcctccaatggaggaggctctctaccatggctgctgtacggcgagccactggggcagggg
aagccggccatgtcgccggagggcgtggtgccgagagcacagactcctctggatcctcct
caggttccagccatggacaggggtgtccctgaaattctgaacttctccatggttccaggt
aaaggagaaaaatgttctgagcactcaactactattgctctgcagtcaccatttgcagaa
tataatggctgttttgagctgggccttggtcaatctgtggttccctctaattatccttat
gctgaccagcactatggcctactttctccttatggagtgagaccaacgcctagcgggcga
attcttattccaccaaatatgccagctgatgcaccaatttatgtgaatgcaaaacagtgt
tcagccatcattcgacgtcgccatgctcgtgccaaggcagagagggagaataggctggtc
aaagctagaaaaccatatcttcacgaatcacgccatcttcatgcaatgcgtcgtgcaaga
ggctctggtgggcgcttcctcaacacgaagaaagagaccaatgggaaaaccactggtgga
ggcaggaaggtgatggacatcatcatcccgcctctgtgccccgccgcatctcccagctcg
gagcagtgcaacccaagcagcgtttccagcctgtccgggtcagaggtgtcgagcatatat
gaacacgaagacatggaccacttccatagctttgatcatctccggacacacttcttcacc
ccgctcccgagcctcatggatgtcgagcacggggctggtaaccccttcaagtggacagca
gcctctgatggctgctgtgacctcctcaaagcatga
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