Oryza sativa japonica (Japanese rice): 4352818
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Entry
4352818 CDS
T01015
Symbol
OsYAB5, OsYABBY6, YAB6
Name
(RefSeq) protein YABBY 6
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4352818 (OsYAB5)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
4352818 (OsYAB5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box
HMG_box_2
Ccdc124
Zn_ribbon_Elf1
Zn_ribbon_Com
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
4352818
NCBI-ProteinID:
NP_001391673
LinkDB
All DBs
Position
12:join(27195439..27195510,27200016..27200153,27202346..27202508,27202864..27202912,27203014..27203089,27204047..27204172)
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AA seq
207 aa
AA seq
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MSAQIAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPA
LQDHHHHHLQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQA
LHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLSPG
HEGGKKLVDVDPIPTAPSSKKIQGFYS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccagatcgctccggcagagcaagtgtgctatgtgcactgcaacttctgcaac
acgattctcgcggtgagtgtcccaggaaacagcatgctgaacatcgtgaccgtccggtgt
gggcactgcacgaatctgctgtcagtgaacttgagaggactgatgcactcagccccagca
ctacaagatcatcatcatcatcatctccaggagagtggtctgagcggatgcttccgtgat
caaagtggctatccggagtttggtttttctgcagcttcgtcgtcttccaagctcaggctg
cctcctgctgctgctgccatggtttcctactcgcagcaaaaccagcagctcgagcaagct
ctccatgctcgccctccagagaagaggcaaagggtaccttcagcctataacagatttatt
aaggaagagatacgaaggatcaaagcaaacaaccccgacattagccacagggaagccttc
agcacagcagccaagaattgggcacattatccaaacatccattttggcctaagccctggc
catgagggtggcaagaagctcgtcgacgtcgaccccatcccaactgctccatcttccaag
aagatccaaggtttctactcatag
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integrated database retrieval system
