Oryza sativa japonica (Japanese rice) (RefSeq): 4352932
Help
Entry
4352932 CDS
T01015
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4352932
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
4352932
Meiosis-specific proteins
Cohesin complex and associated proteins
4352932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
ABC_tran
AAA_27
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
4352932
NCBI-ProteinID:
XP_015619708
LinkDB
All DBs
Position
12:complement(27518410..27529689)
Genome browser
AA seq
1223 aa
AA seq
DB search
MAAAAAGKGGGGQGRIHRLEVENFKSYKGTQTIGPFFDFTAIIGPNGAGKSNLMDAISFV
LGVRSAHLRGAQLKDLIYALDDRDKEAKGRRASVRLVYHLPATGDELHFTRAITGAGGSE
YRIDGRLVTWDDYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDEL
RREYDELEDQKNRAEEKSALIYQEKRTIVMERKQKKAQKEEAENHLRLQQDLKLAKTEHL
LWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSI
AKKKLELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQSALVDVT
RAIDELNEQGQNKSDKLQLADDQLQEYHRIKEDAGMSTAKLRDEKEVFDKELNAGVEAKK
NLEENMQQLRSRENEILSQERELRAKLNKILHSIPKHEDELAHLREEHNKIAKERQTSGV
KYQMLKQRLDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKK
YNLAVTVAMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLG
GSAQLVFDVIQFDRALEKAVLYAVGNTLVCDELDEAKTLSWSGERYKVVTVDGILLTKSG
TMTGGISGGMAARSNKWDDSIIESWKKKKNQYESEMSELGSPRELQRKELAVSEKITGLE
KKLHYLNVEENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREVRVLEKKIN
EIVDRIYKDFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQ
APIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELKAEAEDWKSKSDECETGID
ELKEKNGSVAAALAKLDRQVKSKEGKLVQLRSQEREIHEKCELEQLKLPTVNDPMDTGSS
SQIPILDYSQLSENYLQDMRLSERDKLEAEFKKKIGDLVAQIEHTAPNLKALDQYETLQR
KEKDVMEKFEAARKEELEIADKYNSVKQRRYELFMEAFDHISKGIDQIYKELTKSQTHLL
GGTAYLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSPF
FILDEVDAALDNLNVAKVAGFIRSKSCQRVDEQDNGGCGFQSIVISLKDSFYDKAEALVG
VYRDSERCCSRTLTFDLTKYREA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcggcaggcaaaggcggcggcgggcaggggcgcatccatcggctggag
gtggagaacttcaagtcgtataaggggacgcagacaatcgggcccttcttcgacttcacg
gccatcatcggtcccaatggcgccggcaagtccaacctcatggatgccataagctttgtg
ctcggcgttcgatccgcccacctccgaggcgcccagctcaaggacctcatctacgccctc
gacgaccgcgataaggaggccaagggccgcagagcctccgtccgcctcgtctaccacctc
cccgccaccggggacgagctccacttcacccgcgcaatcaccggcgccggtggcagcgag
taccggatcgacggccgtctcgtcacctgggacgactacaacgccaaactcagatccctg
ggcatcctcgtcaaggctcgcaatttcctcgtcttccagggtgatgtggaatccattgcc
tccaagaatcccaaggagctcaccgcacttctggagcagatctctggctctgacgagctc
aggagagaatatgacgagctggaggaccaaaaaaacagggccgaagagaagtctgcgctt
atttatcaagagaaaaggaccatcgtcatggaaaggaagcagaaaaaggctcaaaaggaa
gaggcagagaatcatctacgcctccagcaggacttgaaactagccaagacagaacatctc
ctatggcaactctacaccattgaaaaagatgcagagaaaatagaagctgaacttgaggag
gataggcggtctcttcagcaagtgctggaagagaaccagtcctctgactatgagctttct
gcaaaaaagaaggagcaaagtgggtttctcaagaaaatgacattatgcgagaagagtata
gccaagaaaaagcttgaacttgacaagaaacaacctgagcttcttagattgaaagagcaa
atttctcggctgaaatccaaaatcaaaagctgcaacaaagagatcgacaaaaagaaggat
gatagcaagaaacatttggaagagatgaaaagtttgcagagtgctttggttgatgtcaca
agagctattgatgagttgaatgagcaaggccaaaataaaagcgacaaactgcaattagct
gatgaccaactccaggaatatcatagaattaaggaagatgcgggaatgagtactgcaaaa
ctgagagacgagaaggaagtttttgataaagagcttaatgctggcgttgaagcaaaaaag
aatttagaggagaatatgcagcagctgcgtagccgtgagaatgagattttgtcacaagag
cgtgaattgcgtgcaaagcttaataaaattcttcattcaatccccaagcatgaagatgag
cttgctcacttacgtgaggaacataacaaaattgcaaaggagcgccagacctcaggagtt
aaataccaaatgttgaagcagaggttggatgagatagatacaaaattacgagagctcaaa
gctgacaagcatgaaagtgagcgggatgctcgattttcagaaacagttaggagtttaaag
cggctattccctggagtccatggtcgcatgacagaactttgtaggccttcacagaagaaa
tacaaccttgctgtcactgttgctatggggaagttcatggatgcagtagtggtagaagat
gagaacacaggaaaagaatgcattaaatacttgaaggagcaacgccttcctcctcagaca
tttattcctttacaatcagtccgcgtgaagcctataattgagaagctgcgaacacttggg
gggtctgcacaattggtctttgatgttattcaatttgaccgtgctttggagaaagcggtt
ctgtatgctgttggaaatacgcttgtctgtgatgaacttgatgaagcgaaaaccttaagt
tggagtggtgaaaggtacaaggttgttaccgtcgatgggattcttctgactaaatcgggc
acgatgactggtggaataagcggtggaatggcagctagatctaataaatgggatgacagc
ataatagaatcttggaagaagaagaaaaatcagtatgaatctgaaatgtcagaacttgga
tcccccagggagttacagagaaaggagcttgctgtgtctgagaaaataactggacttgag
aaaaagttacattacttgaatgttgaagagaataatctcagggagaagctacgcagattg
gaatctgagaagagtaatatagaggaagagatcgatcgtcttgagccagtaaaggaggag
ttggagacccgtattggtaaaaaggaacgggaagtgagagttcttgagaaaaaaataaat
gagattgtggaccgtatttacaaagattttagcaagtcagttggggtgaagaacatccgt
gaatatgaagagaggcaacttaaagatgctcaagcactacaggagaggaagctaagcctg
agtaatcaaatgtcaaaattgaaataccagctggaatatgaacaaaaacgagatatgcag
gcaccaattattaaattaaaggagacacgtgaatctctagagaaggaacttaagagttta
caggagagagagtctgaagctagggcggaagctgaacaaatttcaaatcagatggaagag
ctgaaagctgaggctgaagactggaaatccaagtctgatgaatgtgaaacgggtattgat
gaactgaaggagaagaatggtagtgttgctgcagctttggcaaagctggatcgccaagtg
aagtcaaaggaagggaagcttgtgcaacttagatcacaggaacgggagattcatgagaag
tgtgaactggagcaactgaagcttcctacagttaatgatccaatggatactggatcatct
tcacaaataccaatccttgactacagtcagcttagcgaaaactacctacaagatatgcgg
ctttctgaacgtgacaaacttgaggcagagttcaaaaaaaaaataggggatctagttgct
cagattgagcacactgctccaaacctgaaagcgctcgaccaatatgaaacattgcaaagg
aaggaaaaggatgttatggaaaagtttgaagcagcaagaaaagaagagctggagatagct
gacaagtacaattctgtcaagcaacgaaggtatgagctgttcatggaagcctttgatcac
atatcaaaaggcatagaccaaatctataaggagttaacaaaaagtcaaacacatctactt
ggaggaacagcatatttaaatctagaaaatgaagatgagccatttttacatggaatcaag
tacacagctatgcctccgacaaagcgctttagagatatggaacagttatctggtggtgag
aagactgtcgctgccctggcattgctttttgccattcacagtttcaggccatccccattc
ttcatattggatgaagttgatgctgctctggataatttaaatgttgccaaggttgctggg
tttatcagatcaaagtcatgccagcgcgttgatgaacaagataatggaggatgtggattt
cagagcatcgttatatcgctgaaggacagtttctatgacaaagctgaagcgctggttggt
gtttatagggactcagaacgatgttgctcgagaaccctaaccttcgacctgacgaagtat
agagaagcatga
DBGET
integrated database retrieval system
