KEGG   Oryza sativa japonica (Japanese rice): 4352932
Entry
4352932           CDS       T01015                                 
Name
(RefSeq) structural maintenance of chromosomes protein 1
  KO
K06636  structural maintenance of chromosome 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4352932
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    4352932
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    4352932
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_15 AAA_21 AAA_29 ABC_tran AAA_13 AAA_27 SbcC_Walker_B
Other DBs
NCBI-GeneID: 4352932
NCBI-ProteinID: XP_015619708
LinkDB
Position
12:complement(join(28237382..28237430,28237529..28237750,28238150..28238401,28238922..28239301,28239441..28239550,28240103..28240272,28240475..28240683,28240767..28240856,28241364..28241503,28241595..28241702,28241865..28241974,28242967..28243091,28243736..28244006,28244131..28244397,28245703..28245941,28246852..28247085,28247182..28247418,28247515..28247973))
AA seq 1223 aa
MAAAAAGKGGGGQGRIHRLEVENFKSYKGTQTIGPFFDFTAIIGPNGAGKSNLMDAISFV
LGVRSAHLRGAQLKDLIYALDDRDKEAKGRRASVRLVYHLPATGDELHFTRAITGAGGSE
YRIDGRLVTWDDYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDEL
RREYDELEDQKNRAEEKSALIYQEKRTIVMERKQKKAQKEEAENHLRLQQDLKLAKTEHL
LWQLYTIEKDAEKIEAELEEDRRSLQQVLEENQSSDYELSAKKKEQSGFLKKMTLCEKSI
AKKKLELDKKQPELLRLKEQISRLKSKIKSCNKEIDKKKDDSKKHLEEMKSLQSALVDVT
RAIDELNEQGQNKSDKLQLADDQLQEYHRIKEDAGMSTAKLRDEKEVFDKELNAGVEAKK
NLEENMQQLRSRENEILSQERELRAKLNKILHSIPKHEDELAHLREEHNKIAKERQTSGV
KYQMLKQRLDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKK
YNLAVTVAMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLG
GSAQLVFDVIQFDRALEKAVLYAVGNTLVCDELDEAKTLSWSGERYKVVTVDGILLTKSG
TMTGGISGGMAARSNKWDDSIIESWKKKKNQYESEMSELGSPRELQRKELAVSEKITGLE
KKLHYLNVEENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREVRVLEKKIN
EIVDRIYKDFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQ
APIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELKAEAEDWKSKSDECETGID
ELKEKNGSVAAALAKLDRQVKSKEGKLVQLRSQEREIHEKCELEQLKLPTVNDPMDTGSS
SQIPILDYSQLSENYLQDMRLSERDKLEAEFKKKIGDLVAQIEHTAPNLKALDQYETLQR
KEKDVMEKFEAARKEELEIADKYNSVKQRRYELFMEAFDHISKGIDQIYKELTKSQTHLL
GGTAYLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSPF
FILDEVDAALDNLNVAKVAGFIRSKSCQRVDEQDNGGCGFQSIVISLKDSFYDKAEALVG
VYRDSERCCSRTLTFDLTKYREA
NT seq 3672 nt   +upstreamnt  +downstreamnt
atggccgcggcggcggcaggcaaaggcggcggcgggcaggggcgcatccatcggctggag
gtggagaacttcaagtcgtataaggggacgcagacaatcgggcccttcttcgacttcacg
gccatcatcggtcccaatggcgccggcaagtccaacctcatggatgccataagctttgtg
ctcggcgttcgatccgcccacctccgaggcgcccagctcaaggacctcatctacgccctc
gacgaccgcgataaggaggccaagggccgcagagcctccgtccgcctcgtctaccacctc
cccgccaccggggacgagctccacttcacccgcgcaatcaccggcgccggtggcagcgag
taccggatcgacggccgtctcgtcacctgggacgactacaacgccaaactcagatccctg
ggcatcctcgtcaaggctcgcaatttcctcgtcttccagggtgatgtggaatccattgcc
tccaagaatcccaaggagctcaccgcacttctggagcagatctctggctctgacgagctc
aggagagaatatgacgagctggaggaccaaaaaaacagggccgaagagaagtctgcgctt
atttatcaagagaaaaggaccatcgtcatggaaaggaagcagaaaaaggctcaaaaggaa
gaggcagagaatcatctacgcctccagcaggacttgaaactagccaagacagaacatctc
ctatggcaactctacaccattgaaaaagatgcagagaaaatagaagctgaacttgaggag
gataggcggtctcttcagcaagtgctggaagagaaccagtcctctgactatgagctttct
gcaaaaaagaaggagcaaagtgggtttctcaagaaaatgacattatgcgagaagagtata
gccaagaaaaagcttgaacttgacaagaaacaacctgagcttcttagattgaaagagcaa
atttctcggctgaaatccaaaatcaaaagctgcaacaaagagatcgacaaaaagaaggat
gatagcaagaaacatttggaagagatgaaaagtttgcagagtgctttggttgatgtcaca
agagctattgatgagttgaatgagcaaggccaaaataaaagcgacaaactgcaattagct
gatgaccaactccaggaatatcatagaattaaggaagatgcgggaatgagtactgcaaaa
ctgagagacgagaaggaagtttttgataaagagcttaatgctggcgttgaagcaaaaaag
aatttagaggagaatatgcagcagctgcgtagccgtgagaatgagattttgtcacaagag
cgtgaattgcgtgcaaagcttaataaaattcttcattcaatccccaagcatgaagatgag
cttgctcacttacgtgaggaacataacaaaattgcaaaggagcgccagacctcaggagtt
aaataccaaatgttgaagcagaggttggatgagatagatacaaaattacgagagctcaaa
gctgacaagcatgaaagtgagcgggatgctcgattttcagaaacagttaggagtttaaag
cggctattccctggagtccatggtcgcatgacagaactttgtaggccttcacagaagaaa
tacaaccttgctgtcactgttgctatggggaagttcatggatgcagtagtggtagaagat
gagaacacaggaaaagaatgcattaaatacttgaaggagcaacgccttcctcctcagaca
tttattcctttacaatcagtccgcgtgaagcctataattgagaagctgcgaacacttggg
gggtctgcacaattggtctttgatgttattcaatttgaccgtgctttggagaaagcggtt
ctgtatgctgttggaaatacgcttgtctgtgatgaacttgatgaagcgaaaaccttaagt
tggagtggtgaaaggtacaaggttgttaccgtcgatgggattcttctgactaaatcgggc
acgatgactggtggaataagcggtggaatggcagctagatctaataaatgggatgacagc
ataatagaatcttggaagaagaagaaaaatcagtatgaatctgaaatgtcagaacttgga
tcccccagggagttacagagaaaggagcttgctgtgtctgagaaaataactggacttgag
aaaaagttacattacttgaatgttgaagagaataatctcagggagaagctacgcagattg
gaatctgagaagagtaatatagaggaagagatcgatcgtcttgagccagtaaaggaggag
ttggagacccgtattggtaaaaaggaacgggaagtgagagttcttgagaaaaaaataaat
gagattgtggaccgtatttacaaagattttagcaagtcagttggggtgaagaacatccgt
gaatatgaagagaggcaacttaaagatgctcaagcactacaggagaggaagctaagcctg
agtaatcaaatgtcaaaattgaaataccagctggaatatgaacaaaaacgagatatgcag
gcaccaattattaaattaaaggagacacgtgaatctctagagaaggaacttaagagttta
caggagagagagtctgaagctagggcggaagctgaacaaatttcaaatcagatggaagag
ctgaaagctgaggctgaagactggaaatccaagtctgatgaatgtgaaacgggtattgat
gaactgaaggagaagaatggtagtgttgctgcagctttggcaaagctggatcgccaagtg
aagtcaaaggaagggaagcttgtgcaacttagatcacaggaacgggagattcatgagaag
tgtgaactggagcaactgaagcttcctacagttaatgatccaatggatactggatcatct
tcacaaataccaatccttgactacagtcagcttagcgaaaactacctacaagatatgcgg
ctttctgaacgtgacaaacttgaggcagagttcaaaaaaaaaataggggatctagttgct
cagattgagcacactgctccaaacctgaaagcgctcgaccaatatgaaacattgcaaagg
aaggaaaaggatgttatggaaaagtttgaagcagcaagaaaagaagagctggagatagct
gacaagtacaattctgtcaagcaacgaaggtatgagctgttcatggaagcctttgatcac
atatcaaaaggcatagaccaaatctataaggagttaacaaaaagtcaaacacatctactt
ggaggaacagcatatttaaatctagaaaatgaagatgagccatttttacatggaatcaag
tacacagctatgcctccgacaaagcgctttagagatatggaacagttatctggtggtgag
aagactgtcgctgccctggcattgctttttgccattcacagtttcaggccatccccattc
ttcatattggatgaagttgatgctgctctggataatttaaatgttgccaaggttgctggg
tttatcagatcaaagtcatgccagcgcgttgatgaacaagataatggaggatgtggattt
cagagcatcgttatatcgctgaaggacagtttctatgacaaagctgaagcgctggttggt
gtttatagggactcagaacgatgttgctcgagaaccctaaccttcgacctgacgaagtat
agagaagcatga

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