Oryza sativa japonica (Japanese rice): 6450196
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Entry
6450196 CDS
T01015
Symbol
rps3, OrsajM_p18
Name
(RefSeq) ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
6450196 (rps3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
6450196 (rps3)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
6450196 (rps3)
Bacteria
6450196 (rps3)
Archaea
6450196 (rps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
VAR1
VirE2
Peptidase_S32
Motif
Other DBs
NCBI-GeneID:
6450196
NCBI-ProteinID:
YP_002000565
UniProt:
P46773
Q7JAJ0
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All DBs
Position
MT:join(170836..170909,172757..174298)
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AA seq
538 aa
AA seq
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MARKGNPISVRLDLNRSSDPSRFSDYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRC
IILHFPKRTFIHFFLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERN
EVRGRGAGKRVESIDREKQNEIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHPKY
AGVVNDIAFLIENDGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFVA
PGVAEPSTMGGAKGGSLDKRIRSRIAFFVESSTSEKKCLARAKKRLIHFIRQANDLRFAG
TTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYAREQLLGQLRIKCRNLMGKDKVMELIE
KFIYLGRIGKLIKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRTNTNTLIESVK
IKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRICCSGRLGGAE
IARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISYSQNKKGRAISETYEI
NT seq
1616 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaaaggaaatccaatttcggtaagacttgatctgaatcgtagttcagatcca
agtcggttcagtgattattattatggtaaatcattgtatcagatgtcaatcttagatctt
atttcagttcgatacgtccacctacgatactcacctttggctttcgtctcggtaggtgta
ttattctacattttcccaaaaggacattcattcatttctttcttccccgtcgaccactac
gactaaaacgacgcgacaaatcaagacccggaaaggataagggccggtggtgggcatttg
ggaaagtcgggccgatcgggtgtcttcattcaagcgagggtacagaggaagaacgaaacg
aagtgagaggccggggggcagggaaaagagtcgagtcgatcgaccgggagaagcaaaacg
aaatcaggatttggccgaaaaagatgcaacgttatggataccatgaccgatcaccatcga
gaaagaagaatttttctaaatcacttcgggtgagcggggccttcaagcatccgaaatacg
ccggggttgtaaatgacatagccttcctgatagaaaatgacggcccgacgagtcatctac
taaaaaggaccctccccgctgtgcgcccctccttgaattattcggtcatgcaatactttt
ttaatacaaagaacaaaatgcatttcgaccccgtcgtagttctcaatcatttcgtggcac
cgggtgtggctgaaccatctacgatggggggagcgaagggaggaagcttagataagagaa
tacgctctcgcatcgctttttttgtagaaagctcgaccagcgagaaaaagtgtttggccc
gagccaaaaagaggttgatccacttcattcgccaagcgaatgatcttcgcttcgcgggaa
caacaaaaaccaccatctcgctctttcctttcttcggtgctacctttttttttccaaggg
atggggttggggtgtataataacccattttttgagtatgcccgggaacaactcctaggtc
aattaaggatcaaatgtaggaacctcatgggtaaggataaggtaatggaattgatagaga
aattcatctacctaggtaggataggcaaattgataaagggaatagagatgatgatagaga
tcatactgagaaagaggataattccgtacgggtacaactcttatttgaacgaagtgcaaa
aaatgcgatcttttttgtctaatagaacaaacactaataccttaattgagtcggtaaaga
tcaaatctgtttatcaaagtgcttctctgattgctcaagacatctcttttcaactgggga
acaatccaatctcatttcgttccatttttagtcaaatagtgaaggatattccattaataa
tgccaaaaggggtggaggggatacgtatttgttgttctggtcgattagggggtgcggaaa
tagctagaactgaatgcggaaagtatggaaaaacatcttgtaatgtatttaaccagaaaa
tcgattatgctcttgcggaagtatccactcgtaacggaatttcaggtgtcaaagtgcgga
tctcatatagtcaaaataagaagggacgtgctatatccgaaacgtacgaaatatag
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