KEGG   Oryza sativa japonica (Japanese rice): 9266142
Entry
9266142           CDS       T01015                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
osa04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    9266142
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    9266142
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    9266142
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    9266142
   03036 Chromosome and associated proteins [BR:osa03036]
    9266142
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     9266142
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     9266142
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     9266142
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 9266142
NCBI-ProteinID: NP_001403651
LinkDB
Position
2:complement(join(25010224..25010363,25010481..25010551,25010640..25010717,25010813..25010904,25011009..25011077,25011206..25011332,25011421..25011544,25012049..25012167,25012288..25012379,25012459..25012653,25012764..25012886,25012971..25013075,25013171..25013277,25013365..25013566))
AA seq 547 aa
MSNAGRRRRSLTSIAPSPVSSSSFPSGAREAQAPPSQLPSWKFSQVLGELPLAAAGEGHD
NGTLQDDGDTISAIEFDGRGEHLAAGDHAGRVILFRRTDDESHPPPPPSRADLERTDYAA
AAPPAYAYMAEFQSHEQEFDVLHSLEIGEKVKKLRWCARPNSSSLSMLATNDRTVKLWKV
SEHRSRKGNGQPRRRRSTPTSASLSEIALLGEGDSSVRNGYYYEWASKKARNYLSPDSAE
HSEKASEVGEGYTAKCRRVFARAHVYNINSISNNCDGETFVSADDLRINLWHLEVTDQCF
NVVDMKPADMEDLVEVITSAEFHPSSCSLLAFGSSRGFVRLVDLRQSALCDRNVRIFQDR
GNSVQPRTLFTEIISCISDVKFTGDGKYLLTRDYMNLKLWDLRVESSPVATYKVHEFLRP
KLSELYNNDCIFDRFSCCSSKGGDYFATGSYSNTFKIFSRAAANPNGTTLEASTNPYRIQ
SFPSAKSQGLLSNFARGIQRKGQDGPRSDGREDTKCNMTSKVTHLAWHPMENFIVCAANN
SLYMYHT
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgagcaacgccggcaggaggaggaggagcctgacctccatagctccctcccccgtttcc
tcctcttctttcccttccggcgcccgggaagctcaggcgccgccgtcccagcttcccagc
tggaagttctcccaggtgctcggcgaactgccgctcgccgccgccggcgaaggccacgac
aacggcacgctccaagatgacggtgatacgatctcggcaatcgagttcgacggccggggc
gagcacctggccgccggcgaccacgccgggcgcgtcatcctcttccgaagaaccgacgac
gagagccacccgccgccgccgccgtctcgcgccgacctggagcgcacggactacgccgcg
gcggcgccgccggcgtacgcctacatggcggagttccagagccacgagcaggagttcgac
gttctgcacagcttggagatcggcgagaaggtgaagaagctgagatggtgcgcgcggccg
aacagctcgtcgctgtccatgctcgccaccaacgaccgcaccgtcaagctctggaaggtc
tccgaacacaggtcgaggaaagggaacggccagccgcggcggcggcggagcactccgact
tcggcgtcgctgtccgagatcgcgctgctcggggagggtgattcgagcgtaagaaatggg
tattattacgagtgggcgagcaagaaagctaggaactatttgtcccctgattcggctgaa
cattccgaaaaggcaagtgaggttggagaaggatataccgcgaagtgccggagagtgttc
gcccgtgctcatgtgtacaacatcaactccatttcgaacaactgtgacggggagacgttc
gtgtcggccgacgacctcaggatcaacctgtggcacctggaggtgacggaccagtgcttc
aacgtcgtggacatgaagcccgcggacatggaggatctcgtagaggtgatcacttcggca
gagttccacccgtcgtcgtgcagcctcctcgccttcggcagctcgaggggcttcgtccgg
ctggtcgacctgcggcagtcggcgctgtgcgaccgcaacgtcagaatattccaggatcgt
gggaacagcgtgcagcctaggacgctcttcaccgagatcatctcttgcatctccgatgtg
aagttcaccggagatgggaagtatctgctaactcgagactacatgaacctgaagctctgg
gacttgcgcgtggagagctcccctgttgcaacttacaaggtgcatgagttccttcgtcct
aagctgtcggagctgtacaacaacgactgcattttcgacaggttcagctgctgctccagc
aagggcggggactacttcgccactggatcttacagcaatacattcaaaattttctctcgt
gctgctgcaaatcccaacggaactacgttggaagctagcacgaacccttacaggatacaa
tcattcccctctgcaaagagtcaagggttgctcagcaattttgctcgcggaatccagaga
aaaggtcaagatggaccaagatctgacggccgggaggacactaaatgtaacatgacatca
aaggtgacacatttagcttggcacccgatggaaaacttcatagtttgtgcagctaataac
agcttgtacatgtaccacacatag

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