KEGG T01015: 9266752

Oryza sativa japonica (Japanese rice): 9266752

Entry

9266752           CDS       T01015

Name

(RefSeq) nuclear pore complex protein NUP160 isoform X1

K14303

nuclear pore complex protein Nup160

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    9266752
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    9266752
   03036 Chromosome and associated proteins [BR:osa03036]
    9266752
Messenger RNA biogenesis [BR:osa03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     9266752
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    9266752

SSDB

Motif

Pfam:

NUP160_helical_2 Beta-prop_Nup120_160 TPR_NUP160_120_M HEAT_Nup120 TPR_Nup160_C Beta-prop_WDR35_2nd NUP160_helical

Other DBs

NCBI-GeneID:

9266752

NCBI-ProteinID:

XP_015626925

LinkDB

Position

2:join(2339386..2339597,2340437..2340569,2340655..2340919,2341004..2341064,2341490..2341647,2342613..2342695,2343976..2344080,2344271..2344368,2344748..2344868,2345310..2345492,2345599..2345791,2345889..2346457,2346862..2347024,2347767..2348029,2348142..2348329,2349487..2349557,2349633..2349976,2350607..2350675,2350754..2351063,2351146..2351277,2351374..2351479,2351574..2351639,2351798..2351915,2352080..2352187,2352268..2352417,2352504..2352677,2352773..2352844)

AA seq 1504 aa
MATTTPAARKIAGTEVPIPGSDRVRWIELTVPSTPSPSPEGDSDPFVLVPPRAASGFHVV
SSGDSQCYLAWRFHEEQQNVLEVIDLCAFKEFPSSGLRLVFQEELCPFSFLCAREGGRRG
TPVYLLYVLTVSGVALLCHLRSPFSYISGSIFPQDDIVEFNLQTQVQSAKVTAVTAMSGC
LVIGRQDGSICCYSLGKLALNSPGFLNELRDDAGIGRLWSLVSRTKAVGPVQDIVTATVN
ERELLFVLHLDGSLRIWDIFNHTKLLSYNVRSNDIEGQPSRIWVGDADDDQELIFLAVLR
QGTVTGACDCVSVYGFSFGAGERFLFSPEPSFFSIPLVEGKLIDLKISMDKLWILKEVGS
MLYEIVQYDCDTEIMHSYVLQEVSVSDQLFQSSENTLDDLVWTADSIFSSKKEQTFGFIS
SMFLRRLLQPGVNHSSALRETLLEHKRFLSDSYFQSLTTSGLRKEILSTIEQEGSSQTAS
STAYHWKKFSARYLHNWCWNNRPYGLLLDTNREVFGLIRKGSFSLFRCLEGMEQFIYGSS
DDLRNLDILGVNPSDNISQSEILIEVLRCMDHISHLLGRSAAAIYHESLISSVISPDEIV
SQILKILGTGFSPQSPSALITLFGTDAYAERRQTAHKSQRKFSVEMLLSFRKLQSKSTSW
SAVFDVIENFMKYLNTNVTIQEYELKRVCNVNTALLVQATSQVARTMFESTFDLYLFLNY
LVSIGGQVSLSQNDIARIKLKLFPVIQDILGQWIVLHFVGISPTTPPTIEDFSYQLSSLQ
LGKADDLSLHRKFGCSYFTLACLLDFPKSADGDVLSPWFPNPTELVNLVRRFSGSIMSEN
IAGNADCFLSSTINLAAVLVRHGQYEAAQSLLGILDTHMNYVKASQADQDTDLARSSCLH
LNGFCLLVLARDEANIVLKESKVHEAIRCFFRAASGQEAPKALQKFSVETGFQISGECRS
FTAWRLRYYEWAMQIFEQHSMSEGACEFALGALEQIDSIVDLDNGSEAEDIPETTTMIKG
RLWANVFKYKLDLKNFQEAYCAIISNPDNDSKYVCLRRFIIVLCELGETKVICNGEIPFT
GLVEKVEQELFWKAERSDLLSRPNLYKVLYSFEAYRNNWRKAAAHMYRYFVRLSREGNAG
GTRQLSHTLQERLHALSAAINALQLVDPSFAWLDSVCEADDQISPSKKPCNLLMKNSAFG
TDSELSRLKFCVDIEILEKEYTLTEALYMLSTVNSRFNFSDNQSIEALTDILINENMYDM
VFTIVLKFRKESGMKRELERVFAAIAQQCCPNRVGNSGKNLLLPSSDDDACDGNGNSIAM
AHQSQGSCHWETLEIYLEKYKDLHPRLPVIVAETLLYTDPEIELPLWLVQMFKTTKAGNR
MISWGMSGTEADPATLFRLYINYGRHTEAANLLVEYLESFTSSRPVDVLHRKKMSAAWFP
YTAIERLWCQLEEMQNAGHSVDQCDRLKKLLHGSLISHLQQVVVDSDDVLSSLGGGKGMG
SQSN

NT seq 4515 nt +upstreamnt +downstreamnt
atggccaccaccacccccgccgcccgcaaaatagccggcaccgaggtccccatcccgggc
tcggacagggtgcggtggatcgagctcaccgtcccctccaccccgtccccctcaccggag
ggcgattccgatcccttcgtcctagtgcccccgcgcgccgcctcggggttccacgtcgtc
tcctccggcgactcgcagtgctatctcgcctggaggttccatgaggaacaacaaaatgtt
ctagaggttattgatctctgtgctttcaaggagtttccaagctctggactgcggttggta
ttccaggaggagctatgcccgttttccttcttatgtgcacgtgagggcggcagacgtggc
acacctgtatatctgctatatgtgcttactgtttctggagttgctctcttatgccacttg
cgaagcccattttcctatatctctggttcaatatttcctcaagacgatatagttgaattt
aatctccaaacccaagtacagagtgctaaggttacagctgtaacagcgatgtcaggatgc
ctagtgattgggcgacaagatgggtcaatctgctgttacagtctgggcaagttagctctg
aattcaccaggtttcttgaatgagctccgagatgatgctgggatcggacgtttatggtct
cttgtgtcaagaacaaaggctgtgggccctgtacaagatatagtaacagctactgtaaat
gaaagggaactgctgtttgttctccatctggatggaagtttgcgcatatgggatattttt
aatcacactaaacttctcagttacaatgttcgctcgaatgatatcgaaggtcaaccatct
aggatatgggttggtgatgctgatgatgatcaagagttgatttttttggctgttctgcgt
caaggcactgtgactggagcttgtgattgcgtttctgtatatggttttagttttggtgct
ggtgaaaggttcttgttttctcctgaaccttcatttttttctatacctttggtggaggga
aagcttatcgacttgaaaataagcatggacaagctttggatacttaaggaagttggatca
atgctatatgaaatagtgcagtatgattgtgatactgagataatgcattcatatgtgcta
caagaagtttctgtcagtgaccagttgtttcaaagctctgagaatacattggatgatttg
gtctggacagctgattcaatattctcatccaagaaggagcagacattcggttttatttca
tctatgtttttgcggaggctacttcaaccaggagtgaatcacagttctgctctacgtgaa
accttgttggagcacaagagatttctatccgattcttatttccaatcacttacaactagt
ggactacggaaagaaatattatccaccatagaacaagagggaagttcacagactgcaagt
tcgactgcttatcattggaaaaagttttctgcacggtatctccacaattggtgctggaac
aataggccatatgggttacttcttgatactaacagagaagtttttggtttaataagaaag
ggttcattttctctcttccgttgtttggagggcatggagcagtttatttatggttcctct
gatgacctgcgcaatcttgatatccttggggtgaacccatcggataatatatctcagtct
gaaatcctcattgaagttctaaggtgcatggatcatataagccatctgctggggagatct
gctgctgcaatatatcatgaatccctcatcagttctgttatatcacctgatgaaattgtt
tctcagatcttaaagattctgggcactggtttcagtcctcagtctccctcagccctcatt
acattatttggaacagatgcttatgcagaaagaaggcagaccgctcacaagagtcagagg
aagttttctgttgaaatgttactatcttttcgtaaattgcaatcaaagtcgacatcctgg
tcagcagtatttgatgtgattgagaacttcatgaagtatttgaacacaaacgtgaccatc
caagagtatgagctgaagagagtttgcaatgtgaatactgcgttattggttcaagctact
tcacaggtagcaagaacaatgttcgagtccacttttgatctatatctgttcctcaattat
ctggtctccattggtgggcaggtctccttgtcacaaaatgatattgccagaataaaactg
aagttgttcccagtgattcaagatatactgggacagtggattgtcctccactttgtagga
atttcacctactacaccaccaactattgaggatttcagctatcagctttcttctctccag
ctaggaaaagctgatgacctgtctttgcacagaaagtttggctgctcttattttacattg
gcttgtttacttgattttccaaaatctgctgacggggatgttctctcaccctggtttcct
aatccaactgagttggtcaacttggtaaggaggtttagtggctcaattatgagtgaaaat
attgctggaaatgctgactgtttcttgagttccacaattaatctggcagcagttcttgtt
cgccatggtcaatatgaagctgctcagagtcttctgggcattctcgacacacacatgaac
tatgtgaaagcatctcaagctgaccaggatacagatcttgcacgctcatcatgccttcat
ctcaatggattttgccttctggtgcttgcacgtgatgaagcaaacattgtcctgaaagaa
tccaaggttcatgaagctatccgatgcttcttcagagctgcatctgggcaagaagctcca
aaggctcttcagaagttctctgtggaaacagggtttcaaatctccggggaatgcagatct
tttacagcatggaggcttcgttactatgagtgggcaatgcaaatttttgagcagcactcc
atgagtgaaggggcatgcgagtttgctcttggtgctcttgaacaaatagatagcatcgtc
gatttagataatggaagtgaagctgaggatatccctgaaactacaactatgattaaaggg
cgactatgggctaatgtattcaagtacaaattggatttgaaaaattttcaagaggcgtat
tgcgcaataatctcaaatccagataatgatagcaagtatgtctgtttaagacgtttcatc
atagttctttgtgagcttggcgagacaaaggtaatttgcaatggcgagataccattcact
ggcttggtggaaaaagtggagcaagagctcttctggaaggctgagcgctcggatcttttg
tctagaccaaatctttacaaggtcctttattcatttgaggcttataggaacaattggagg
aaggctgctgcacatatgtataggtatttcgttagattgagtagagagggtaatgctggt
ggaacccggcaactttctcatacattgcaagagaggctgcatgctttgtctgctgctatc
aatgcattgcagcttgttgatccctcattcgcttggcttgattctgtttgtgaagcggat
gatcaaatctcaccaagtaaaaagccctgtaatcttttgatgaagaactctgcttttggc
acagattcagagctgtctaggttgaagttttgtgttgacattgaaattctcgaaaaggaa
tatacactaacagaagcactctatatgctcagcactgtaaattctagattcaacttttca
gataaccaatctattgaagcactgacggatattcttataaatgagaatatgtacgacatg
gtgttcaccattgtgctgaaatttcggaaggagtcaggaatgaaaagggagttggaacgt
gtatttgcagcaattgcgcagcaatgctgccctaatagagtgggcaactcagggaagaat
ttactgctgccatcttccgatgatgatgcctgtgatggcaatggtaacagtattgccatg
gctcatcaatcccaggggagttgccattgggagactcttgaaatatatttggagaaatac
aaagatttgcatcctaggttgcctgtcattgttgcggaaacacttctttacacagaccct
gagattgagctaccactttggctagtccagatgtttaagaccaccaaggctggtaacagg
atgatttcatggggtatgtctggcacagaggcagaccctgctacattatttagattgtac
ataaattatggacggcacacagaagcggccaatttgctggtcgagtacttggaatcattc
acatcatcgagacctgtggacgttctccaccgcaaaaagatgtcagcggcctggttccca
tacactgccatcgagaggttgtggtgtcagctagaagagatgcaaaatgctggccacagc
gtggatcagtgcgacaggctcaagaagttgctacatggatctctgattagtcacctgcag
caagttgtggttgattcagatgatgtgctttcatcgcttggaggagggaaaggaatgggg
agccaaagcaattga

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