Oryza sativa japonica (Japanese rice): 9267257
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Entry
9267257 CDS
T01015
Name
(RefSeq) chloride channel protein CLC-e isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
9267257
Transporters [BR:
osa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
9267257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
CARM1
Motif
Other DBs
NCBI-GeneID:
9267257
NCBI-ProteinID:
XP_015622009
LinkDB
All DBs
Position
1:join(29805235..29805558,29806100..29806487,29806892..29807089,29807572..29808038,29808156..29808695,29809221..29809423,29809513..29809570)
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AA seq
725 aa
AA seq
DB search
MRCLSQFMAPPSVAPCPARVLLVSTPSPPSLSRRRPAGRRCGGGDGGARLRTIRCGAATE
EEDGDRRGERVEAAWEEEVAAPGRDLVTLAACLVGLLSGVSVVLFNLSVHEIRDLFWDGI
PLRGASWLREESIGEIWQRVILVPVSGGIIVGVFNTLRSSIATNSNDTMSKIKGAFRPFL
KAMAASFTLGTGNSLGPEGPSVEIGSSIAKGFGNVFKLEGGKKLSLVAAGSAAGIASGFN
AAVAGCFFAVESVLWPTSVDSSSLSNSTPMVILSAVIASVVSEIGLGSDPAFTVPEYDFR
SPTELPLYLLLGIFCGLVSTTLSRCTALSMEIVQSLQTATGLPKAASPALGGLIVGLLAL
VYPEVLYWGFENVDILLESRPFTSGLSAAVLVQLIGVKVLATSLCRAFGLVGGYYAPSLF
IGAATGMAYGKVMRFTFTGPDSLFQIPFLDVASPQAYGLVGMAATLAGVCKVPLTSVLLL
FELTQDYRIVLPLLGAVGVSSWIASPQRFSRSNRSKPDSSEVKSSNFKQEKSVPSQTQGA
SVDTDKPITDLCKLESSLCVYDAKHENFQENLTVAEAMKTKYISVSKTTPVVEALNLMLV
EKQPFVMIIESNRSLIGLVTLKDIQDFCRTAKTTRVQTEEPVQTYVCGAVKCKMWPVTPQ
TSLTTVEKIMDSYGVDQLPVVSEHVDRQDRGLLVGFVDKEGIAIARRAVATKDLLSFTSE
IKGDR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagatgcctctcccaattcatggcgccgccgtccgtggcaccctgtcccgcgcgtgtc
ctcctcgtctcgaccccatccccgccttctctctcccgccgccgcccggcaggtcgccgc
tgcggtggcggggacgggggcgcgcgcctccggaccatccgatgcggcgcggcgaccgag
gaggaggacggggaccggcggggtgagcgggtggaggcggcctgggaggaggaggtggcg
gcgcccggccgtgacctcgtcacgctcgccgcctgcctcgtcgggctcctcagtggcgtc
tccgtcgtcctcttcaacctctcggttcatgaaatacgtgatctcttttgggacggcata
ccattgagaggcgcttcatggctaagggaggagtccatcggtgaaatctggcagagagtg
atacttgttccagtcagtggaggcattatagttggagtgtttaacacattaagaagttct
atagcaaccaactcaaatgacactatgtctaagataaaaggtgcctttaggccatttttg
aaagccatggcagcatcttttactcttggaactggaaattctttggggcctgagggtcca
agtgtggagattggttcatctatagccaaaggatttggaaatgtgtttaaattggaagga
gggaaaaaactttctcttgtggcagctggatcagcagctggaatcgcatcaggttttaat
gctgctgttgccgggtgctttttcgccgtggaatctgttttgtggcctacttctgttgac
tcttcatccctttccaactcaacacctatggtgatactcagtgcagtgatagcgtctgtt
gtttcagagattggtcttggttctgatcctgcttttaccgttccagaatatgatttccgc
tcgccaacagaacttcctctatatcttttgctgggcatcttctgtgggttggtgtctact
acactatctaggtgtacagcactttctatggagatagttcaaagtttacaaacggcaacc
ggattaccaaaggctgcatctcctgccttgggtggccttattgttggtcttctagccctt
gtataccctgaagttctttattggggctttgaaaatgttgatattttgctggaatcacga
ccattcacaagtggactctcagcagctgtattggttcagctcattggagtaaaagtattg
gcgacatctttgtgcagggcttttggattggttggaggctattatgcaccatcccttttt
attggtgcagctacaggcatggcgtatggaaaggtcatgaggtttacatttactggcccg
gattcactgttccaaatcccgttcctagatgtggcgtcacctcaagcatatggcctggta
ggtatggcagccacgcttgctggtgtatgcaaggtgcctcttacatctgtcctcctactg
tttgagcttactcaggactatcgtatagttttacctttgcttggtgctgttggagtatca
tcttggattgcttctccccagaggttctctaggagcaataggagtaagccggattcctca
gaggtgaaatcaagtaattttaaacaggaaaaaagtgtgccctcccagacacaaggagct
tctgtggatacagataagcctattaccgacctatgtaagcttgaaagttcactgtgtgtc
tatgatgccaagcatgagaattttcaggaaaatcttactgttgcagaggctatgaagact
aaatatatttctgtttcaaagacaactccagtagttgaggcactaaatcttatgcttgtg
gaaaagcaaccgtttgttatgataattgagagcaacagatctctaataggcttggtaact
ctcaaagatatccaggatttctgcagaactgcgaaaactaccagggtacagactgaggaa
cctgtacaaacttatgtttgtggagccgttaagtgtaaaatgtggcctgtgacacctcag
acatctctaactactgttgaaaagatcatggattcttatggagtggatcaacttccagta
gtttcagaacatgttgatcgtcaagatagaggactcttggttggttttgtagataaagaa
ggcattgccattgctcgaagagctgtagcaacaaaagatcttttgagttttacatctgag
ataaagggggatagatga
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