Oryza sativa japonica (Japanese rice): 9267365
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Entry
9267365 CDS
T01015
Name
(RefSeq) nuclear pore complex protein NUP58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9267365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
9267365
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9267365
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NNH6
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
9267365
NCBI-ProteinID:
XP_015633040
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Position
3:complement(join(32662217..32662684,32663015..32663464,32664013..32664127,32664627..32665351))
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AA seq
585 aa
AA seq
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MSRFRVVEDEAEADLQALARRFSFSSSSSPSPSPSPPSSSRKPPLPPRRSPQKRPGLPTI
PENGPPAGMATATATPKRTRTPTSTCAPPPPPHARHAPMTGQTPVAGSRSSRPPRGRGQM
EVDSPQPSRALHTPPTGQRQVTRHPPPAARTMFQESPVASVSPPQQQQVAVPVSAALREF
ERRRAAAAAEAALRQLQLQVWEAARQQSQQLRLYTVEGRAAGYGTKWVELHPQSQELLLH
IENKMREYKHESDLLDQCSRLYDPSVSSRSFELYATQISQEIGSTSTIMDREMVSIRSLM
AVVEEMMRNTDSAIRSYQKLRPNFIRRYSGTANTGFAHHAGPSGAPTYFNQPSAIVPTFD
FYSGVAMRPSPFMQHTVSKFENRLEECSRMVGELEQLIQIKNDKNYSNAFESLSTVVPNV
YDYLIHVATQVENLHQYAEVMRTHYRNAWRLMGDCSDPFLEADRREAAKQEATARIVHPT
GVDVSVLASQPLQLSSPTGVTSSSTRAILRTPLSALPWFSIQTSPAPSPSPFSSSGSMLQ
PTPFGSASTLALGSTPARFASSALGGTSLFRTPPGGTHNILCVTG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcagggtcgtggaggatgaagctgaggcggacctgcaggccttggcgagg
cgcttcagcttctcgtcatcctcctccccctcgccctcgccctcgccgccttcgtcgtcg
cggaagccgccccttccccctcgccggtcgccccagaagcggccggggctccccacaatc
ccggagaatggcccaccggcggggatggcgacggcgacggcgacgccgaagcgcacgcgg
acaccaacctctacgtgcgccccgccgccgccgcctcacgcgaggcacgctccgatgacg
ggtcagacgccggtggctggctctcggtcgtctcgcccgccgcgcgggcgcggccagatg
gaggtggatagccctcagccgtctcgtgcactgcacacgccgccgacgggtcagaggcag
gtgactaggcacccgccgccggctgcgcggacgatgttccaagagtctcccgttgcgtcc
gtgtccccgcctcagcagcagcaggtggccgtgcccgtgtcggcggcgttgagggagttc
gagcggcgtcgcgcggcggcggcggcggaggcggcattgcggcagctgcagcttcaggtg
tgggaggcagcgcggcagcagtcgcagcagctgaggctgtacacggtggagggaagggct
gcggggtacgggacgaagtgggtggagctgcatccgcaatcgcaggagcttctgctgcac
atcgagaacaagatgagggagtacaagcatgagagcgatctgttggaccagtgcagccgc
ctctacgacccatcagtctctagcaggagttttgagctgtatgctacgcagatttctcag
gagataggatcaacctccaccatcatggacagggagatggtttccattcggagcttaatg
gctgtggtcgaagaaatgatgcggaacacagattcggctatacgctcatatcaaaagctg
agaccaaatttcatccgtagatattctggaactgcaaatactggttttgctcatcatgct
ggaccatctggtgctccaacttatttcaatcaaccctcagcaattgtgccaacatttgat
ttttacagtggtgttgcaatgcggccttctccttttatgcaacacactgtttccaagttt
gagaaccgtcttgaggaatgcagcagaatggtcggagagctagagcagcttattcaaata
aagaatgataagaactattcaaatgcgttcgaatccctgtcaacagtagtgcctaatgtg
tacgactatctcatccatgttgctacccaggtggaaaatcttcatcaatatgctgaggta
atgagaactcactatcggaatgcttggcggctcatgggtgattgtagcgatccttttttg
gaggcagatagaagagaggcagctaaacaagaagccactgccagaatagtccatcctaca
ggggttgatgtatctgtgctggcaagccaacctttgcaattgtcatcccctactggcgta
acttcatctagtactcgtgcaattcttagaacaccactttctgctttgccctggttcagc
attcaaacaagtcctgctccatcacccagccctttcagttcatctgggtctatgctgcag
cccacaccatttggctcagcttccacacttgcactaggatccactccagcaagatttgcg
tcttctgctttgggtggcacctcacttttcagaacaccacctggaggtacacataatatt
ctatgtgtaactggatag
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