Oryza sativa japonica (Japanese rice): 9267584
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Entry
9267584 CDS
T01015
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
9267584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
9267584
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
9267584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
PAS_12
Motif
Other DBs
NCBI-GeneID:
9267584
NCBI-ProteinID:
XP_025879608
LinkDB
All DBs
Position
3:join(3517901..3518512,3519314..3519541,3520228..3520395,3520786..3522545,3522625..3522628)
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AA seq
923 aa
AA seq
DB search
MDSDSCKRRKHESGHDSSSRVQSQSSILSRNRILCHQLLEQCDDLKYGSSTNDYKAISMK
RLELISILQKLQEVPIQLPYASPLKSSETNRLVQDGRNSSCRNIIDLDSDNDEDYTFANV
DNIGANTTVVLVDSDDGDSVASFVDEKSSDSKQNANYIEESVLPEQHAQQQEISMLDNEN
ISSEAQAVKKGKDSMDINDVIYNKSGHEEIGEEEAQAENVQIKGNLKKEIISVASDELAC
EVMRSQSPTNGNFDQYDNSSPVDELEGLWMDMYLAMACSKTVGSDHNIVPSENSCEQAED
ECQHDFLMKDDLGIVCRVCGLIQQRIENIFEYQWKKRKQSYRARPSEHRNSSDADAIDKT
SGAILEVVPDALCLHPQHSQHMKPHQVEGFNFLVKNLADENNPGGCILAHAPGSGKTFLI
ISFVHSFLAKYPAGRPLIILPKGILSTWRTEFLHWQVDDIPLYDFYSSKADKRSEQLKVL
NLWEESRSILLLGYQQFACIVSDHTSDTEAIMCQEKLLKVPSLVILDEGHTPRNEETDLL
TSLENIRTPRKVVLSGTLFQNHVREVFNILKLVRSKFLKMDKSRAIVNCILSKVDLMGKS
ARSKNISDKDFFDLVQEHLQKDGNDKMRAVIIQNLRELTADVLHYYQGKLLDELPGIVDF
TVFLNMSSKQEHIIKGLDGINKFAKRSRCNAVSLHPCLKNANKADADDGNVTNRKIGSII
SGIDINDGVKAKFVHNLLSLSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRV
TGGSTQDQREQAVHRFNNSPDARVFFGSIKACGEGISLVGASRIVILDVHENPSVMRQAI
GRAYRPGQSKMVYCYRLVAADSPEEDDHHTAFKKERVSKLWFEWNELCSSDDFELATVDV
SDSEDRFLESSALKQDIKALLKR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatagctgcaaaaggcggaagcatgaaagcggtcacgatagctcttcacgg
gtccagtcccagtcaagcatccttagtcgtaacagaattttgtgtcatcagttgcttgaa
caatgcgatgacttgaagtatgggagctccacgaatgattacaaggcaatcagtatgaag
cggcttgaacttatcagcatcctacaaaagctgcaagaagtacctatccagttgccatat
gccagtccactcaagtcatcagaaacaaatcgccttgtgcaagatggaagaaactctagt
tgtcgtaatataattgacttggattcagacaatgatgaagattatacttttgctaatgtg
gacaatattggtgctaacacaacagttgttttagttgattctgatgacggggacagtgtt
gcatcctttgtagatgaaaaatcatctgattccaagcaaaatgcgaattatattgaagaa
agcgttctgcctgagcagcatgcccaacaacaggaaatctccatgctggataatgaaaac
atcagttctgaagcacaagcagttaagaaaggaaaggatagtatggacatcaacgatgtt
atttacaacaagagtggtcatgaggagataggggaagaggaagcacaagctgaaaatgtc
cagataaaagggaacttaaagaaagagatcatctctgttgcttctgatgaactagcttgt
gaagttatgcgcagtcagtcaccaaccaatggaaattttgatcaatatgacaacagcagc
ccagttgatgagctggaaggactttggatggacatgtaccttgcaatggcatgttcaaag
actgttggaagcgatcataacattgtcccatcagagaattcttgtgaacaagcagaggat
gaatgccagcacgatttcctgatgaaagatgatttgggcattgtctgtcgtgtttgtggt
ctgatccagcaacgtattgaaaatatttttgagtaccagtggaaaaagcggaagcaatcg
tacagagcacgtccctcagaacacagaaattctagtgatgcagatgcaattgacaaaact
tcaggagctattctcgaagtggtccctgatgctctatgcctccaccctcaacattcacag
catatgaaacctcaccaagtggaaggtttcaatttcctggtcaagaacttggcagatgag
aacaaccctggtggctgtattctggcacatgcaccaggttctgggaagacttttttgata
attagttttgtccacagcttcctagccaaataccctgctggaaggccattgattattctc
ccaaagggaattctatcaacatggagaaccgaatttcttcattggcaagttgatgatatt
cctttgtatgacttctactcctccaaagctgacaaacggtctgaacaactcaaagttttg
aacttgtgggaggagagcagaagtatcctgttgttgggctatcaacagtttgcatgcata
gtttctgatcacacttctgatacagaagccatcatgtgccaggagaagttactgaaggtc
ccgagccttgtcattctagatgaaggacacactccaagaaacgaggaaacagacttgctc
acttcactggaaaacatccgaactcctcgtaaagtagtcctctcaggaaccttgttccag
aaccatgtgagggaggttttcaacattttgaaacttgtccgatccaaattcttgaagatg
gacaaatctcgtgctattgttaactgcatactaagcaaggtggacttgatggggaagagt
gcacgatcaaagaatatctcagataaggacttctttgatttggttcaagaacaccttcag
aaagatggaaatgacaagatgagagcggtgattatccaaaatcttcgtgagctaactgca
gatgtgcttcactattaccaaggcaagcttttggatgagctacctggaattgtggacttt
acagtttttctcaatatgagtagcaaacaggaacatattattaagggcttggatggaata
aataaatttgcgaaacgctcgagatgcaatgccgtttctcttcatccatgcttgaagaat
gccaataaagctgatgcagatgatggaaatgtcaccaataggaagatcggttccatcata
tccggaattgatatcaacgacggggtgaaggccaagtttgtacacaatctgttgtctctt
tcagaagccacgggagggaaggtactcgtgttcagccagtatgtgcgctctttgattttc
ttggaaaagctggtcagtagaatgaaaggatggaaatcagaggtacatattttcagggtt
actggtggctcaactcaggatcagcgtgagcaagcagtccatagattcaacaactcacca
gatgctagagtcttctttggctccatcaaggcatgtggcgagggcatctccctcgttggc
gcgtctcgtatagtgatcttggatgtccatgagaacccttcagtgatgcgccaggcgatt
ggccgtgcctataggccaggacagtctaaaatggtgtattgctaccgcctcgtcgctgct
gattcgcctgaggaggatgatcaccacaccgccttcaagaaagaacgagtgtcgaagctg
tggttcgagtggaatgagctctgcagcagtgatgattttgagctcgcaacggtggatgtt
tcagatagcgaggacaggttccttgaaagctctgcattgaaacaagatatcaaagcccta
ttaaaaaggtga
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