Oryza sativa japonica (Japanese rice): 9268087
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Entry
9268087 CDS
T01015
Symbol
P0431A02.2
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9268087 (P0431A02.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
9268087 (P0431A02.2)
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
9268087 (P0431A02.2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
9268087
NCBI-ProteinID:
NP_001408987
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All DBs
Position
7:complement(join(5584663..5584971,5586610..5586852))
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AA seq
183 aa
AA seq
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MWAPSSDPSKGFQPKFPLRISINRSAEATGEVRRRRRRRARMSYLLPHLHSGWAVDQAIL
AEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYLVDITEVPDFNTMYELYDPS
TVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTK
YRY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccccgtcatctgacccttcgaaaggctttcagcccaaattccccttgcgaatc
agcatcaacaggtcggcggaggcgaccggagaagttcgccgccgccgccggagaagagcg
aggatgtcgtacctgctgccgcacctgcactccgggtgggcggtagaccaggccatcctc
gccgaggaggagcgcctcgtcatcatccgcttcggccacgactgggacgagacctgcatg
cagatggatgaggtgttggcagcagtggctgagaccataaagaacttcgcggtcatctac
ctggttgacatcactgaggttcctgacttcaacaccatgtacgagctgtatgatccatca
acagtcatgttctttttccgaaacaagcacatcatgattgatcttgggactggaaacaac
aacaaaatcaactgggccctgaaggacaagcaggagttcatcgacattgtggagactgtc
tacaggggtgctcggaaggggcggggtctggtgatcgctccaaaggattactccacgaaa
taccgttattga
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integrated database retrieval system
