Oryza sativa japonica (Japanese rice): 9268316
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Entry
9268316 CDS
T01015
Name
(RefSeq) alpha-L-arabinofuranosidase 1 isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
9268316
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
9268316
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GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Motif
Other DBs
NCBI-GeneID:
9268316
NCBI-ProteinID:
XP_066161898
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Position
11:join(1508761..1508873,1508974..1509160,1509326..1509476,1509843..1509961,1510078..1510190,1510725..1510781,1510871..1511063,1511269..1511412,1511796..1511894)
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AA seq
391 aa
AA seq
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MRSGGRKLLVHGKRDLGTMEMFGTTGPMMALGIMTFSRLGCCSSRVLNIGKYSASTLSCF
TFFLIFSPRIPMNCSEFLSCDLGMSHSDVVNGTMLTPFVKDAIDSLEFARGSKESTWGSV
RAAMGHPEPFPLKYVALGNEDCEIFKPTYQENYPKFYNAIREAYPDIQIISNCDGSSRPL
DHPADLYDFHVFVSEYAVNNDKGGDAGNGSLLASLAEAAFLTGLEKNSDVIQMASYAPLF
VNENDRTWNPDAIVFNSWQQYGTPSYWMQTYFRESSGSVIHPVTISSSYFDLLAASAITW
QDNEDIFLRVKIVNFGPSAVNLTISSSGLQAGVNAAKSTVTVLTSSNLLDENSFSEPNKV
VPVTRELPNAGQEMQFLLLPFSLTSFDLAMF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaggtggaaggaaactattggtccatgggaagagagacctgggcactatggag
atgtttggcactactggaccgatgatggccttgggtattatgactttctccagacttggg
tgctgctccagtcgggtgctcaacattggtaaatattctgcatctactttgtcttgtttt
actttttttttaatcttttctcctcgcataccaatgaactgctcggagtttttatcttgt
gatttagggatgagtcacagtgatgtagttaatggaactatgcttacaccttttgtaaag
gatgcaatagacagtcttgagtttgcaagagggagtaaagaatcaacatggggctctgtt
agagccgcgatgggacaccctgaaccattcccactgaagtatgttgcactcgggaatgaa
gattgtgaaatattcaagccgacataccaagaaaattaccccaagttctacaatgctata
cgagaggcttatcctgacattcaaataatttcgaactgtgatggctcgtctaggccactt
gatcatcctgctgatctgtatgacttccatgtatttgtaagcgagtatgctgttaataat
gacaaagggggtgatgctggcaatggaagcctccttgcatcgttggcagaagctgctttc
ctcactggtttagagaaaaacagcgatgtcattcagatggcaagctatgcaccactcttc
gtgaatgaaaatgatcgcacctggaacccagatgcaattgtcttcaactcctggcaacag
tatggaactcctagttattggatgcaaacatatttccgtgaatcaagtggttctgtgatt
catccagtcactatcagctccagctactttgatttactggcagcatctgcaatcacctgg
caggacaatgaggatatctttctgagggtaaagatagtaaactttgggccaagtgctgtg
aaccttacaatatcttcaagtggacttcaagctggtgtaaatgcggcaaaatcaactgtg
actgttctcacatccagcaacttactggatgagaattcatttagtgaaccaaacaaggtt
gtgccagttacaagggagttacccaatgctgggcaagagatgcagttcttactccttcca
ttctcattgacctcatttgatctggctatgttttag
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