Oryza sativa japonica (Japanese rice): 9268534
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Entry
9268534 CDS
T01015
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
9268534
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
osa01001
]
9268534
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9268534
03029 Mitochondrial biogenesis [BR:
osa03029
]
9268534
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
9268534
Protein kinases [BR:
osa01001
]
Serine/threonine kinases: Other
ULK family [OT]
9268534
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
9268534
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
9268534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ATG1-like_MIT2
ABC1
Kdo
Pkinase_fungal
APH
YrbL-PhoP_reg
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
9268534
NCBI-ProteinID:
XP_015630199
UniProt:
Q10NJ0
LinkDB
All DBs
Position
3:complement(join(8946782..8946985,8947086..8947156,8947240..8947513,8947763..8948133,8948224..8948579,8948655..8948727,8949404..8949509,8949592..8949672,8949764..8949857,8950713..8950777,8950918..8950976,8951066..8951183,8951752..8952024))
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AA seq
714 aa
AA seq
DB search
MGDRAAGSGGGGGGGSGVRRVGDYVLVRQIGSGAYARVWLGKHRTRGTEVALKEIAVERL
SSKLRESLLSEVDILRRIRHPNVIALHESIRDGGKIYLVLEYCRGGDLHSYLQQHKRVSE
TVAKHFIQQLASGLQMLRENNVVHRDLKPQNILLVANNENSLLKIADFGFAKFLEPSSLA
ETLCGSPLYMAPEVMQAQKYDAKADLWSVGIILYQLVTGSPPFTGDSQIQLLRNILNTRE
IRFPSDCDLSHGCIDLCRKLLRINSVERLTVEEFVNHPFLAEHALERTLSRTPSDIRDGF
PFINSSPTRPSSQSSQEDCMPFPLDDESTGQDEGPVSDSKSAIKSYGFATSKRLDKTSGQ
SPTKHSSLVSKYIRGNNYASSSQRLDHPRRIKENKGDEGHNPKGGYPEDSPIIDSLEFVD
QEYVFVHPEGSSSSMNDSRQRTMPSKLDSSSLSPPKLLTAVSAPRPIHGMAINRQQSGGT
GSLDSHCSPVSGTSQGSADLNDAMDQPPSDCLTRVRLLEQYASTIAELVKEKIKDAKHLE
GFSIQLVVLATWKQAIYICTSYASSATRENPSHDVTAKGFGSNAPHLLANSQLLYDTCME
IESQFLVQMEYAEELANTIGQTVDATEMPDAIEIIFQTALNLGRHGGVDEMMGKSASAMV
LYSKAVSMLRFLLTEAPSLALNPALSLTRDDRRRLRTYIEAVNARLVPLQYQRH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccgcgccgcggggagcggcggcgggggagggggaggaagcggcgtgcggagg
gtaggggactacgtgctggtgcggcagatcgggtcgggggcgtacgcgcgggtctggctc
gggaagcaccgcacgcggggcacggaggtggccttgaaggagatcgccgtggagcggctt
agcagcaagctccgcgagagcctcctctccgaggtcgacatcctccggcgcatccgtcat
cccaacgtcatcgccctccacgagtccatcagggatggtgggaaaatatatcttgtatta
gagtactgtcgaggtggtgacttacactcataccttcagcagcataaaagggtttctgaa
acagttgctaagcatttcatccagcagctagcatctggtctgcagatgctgcgtgaaaac
aacgtggttcatcgagatctaaaaccacagaacattcttctagttgcaaataatgaaaat
tccctcttgaagattgcggactttggatttgcaaagtttttagaaccttcttctctggct
gaaacactttgcggttcaccgctttacatggctccagaagtcatgcaagctcagaagtat
gatgcaaaggcagatttgtggagtgttggtataattctatatcaacttgttaccggatct
cctccttttaccggggatagtcaaatccagttgctgagaaatatactcaatacacgagaa
atacgatttccatctgattgcgacttgagccatggctgcattgacttatgcagaaagtta
ctgcgaatcaattcagtggaacgccttaccgttgaagagtttgtgaaccatccatttctc
gctgaacatgctttggagagaaccttgagccggacaccatcggacataagagatggcttt
ccattcattaatagcagtcctacgagaccttcaagccaaagttctcaggaagattgtatg
ccttttcctttggatgatgagtcaactggacaggatgaaggtcctgtttctgatagtaag
agtgcaataaaatcctatgggtttgccacgagtaaaaggcttgataaaacttcaggtcag
agtccaacgaaacattcaagtctggtctctaaatatattaggggaaataattacgcatct
agtagtcaacgcctggaccatcctaggagaatcaaggaaaacaagggtgatgaagggcac
aaccctaaaggtggttatccagaagattcccctatcattgattcattagagtttgtagat
caggaatatgtctttgtgcacccagagggatcctcctcttcgatgaatgactcccgacag
cgcaccatgccatcaaaacttgacagttcttctctttcaccaccgaagttattaactgct
gtgagtgcaccaaggccaatacatggcatggcaattaacagacagcaatctggtggaact
ggtagcttggacagtcactgctctccagtatctggtacttcacaaggatctgcagatctc
aacgatgctatggatcaaccaccatctgattgtctgaccagggttagattattggagcag
tatgcgtctaccatagcagaattggtgaaagaaaagattaaagatgccaagcacttagag
ggattctcgattcagctagttgttcttgcaacctggaagcaagcaatttacatctgcact
tcttatgcatcttctgccacaagagagaatccttcccatgatgtcaccgcgaagggtttt
ggctcaaatgctccccatttgcttgcaaactctcaactgttatatgatacatgcatggag
atagagagtcagtttttggttcaaatggaatatgctgaagaacttgccaacactatagga
cagacagttgatgctacagaaatgccagatgcgatagaaatcatatttcagaccgcgctt
aacctgggaagacatggtggtgttgatgagatgatggggaaatcagcatctgccatggtg
ctgtactcgaaggcagtatccatgctgcgctttctcctgactgaggcaccgtcactcgcc
ctgaaccccgctctgtccctaacaagagatgatcgacgccgcctgcgcacatacattgaa
gccgttaacgctaggctcgtcccgttgcaataccagcggcactga
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