Oryza sativa japonica (Japanese rice): 9268567
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Entry
9268567 CDS
T01015
Symbol
OsC3H60, U2AF35A
Name
(RefSeq) splicing factor U2af small subunit A
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9268567 (OsC3H60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
9268567 (OsC3H60)
Spliceosome [BR:
osa03041
]
Complex A
U2 snRNP components
U2 related factors
9268567 (OsC3H60)
Complex B
9268567 (OsC3H60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_DUS3L
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
9268567
NCBI-ProteinID:
NP_001391789
LinkDB
All DBs
Position
9:23387921..23388793
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AA seq
290 aa
AA seq
DB search
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP
GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED
QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL
RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR
RSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagccg
tcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcacccct
ggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgaggat
ttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacgtg
tgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggaggat
caggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatcatt
gtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagagaac
agctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacctg
aggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggccggagc
cgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcatcgcggtcc
agggaccacgacgattactaccgtggaggtagccacgattactaccgtggaggtagccgg
aggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcggcacagg
tccaggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcag
tggaaccgtgaaagggaggctgcacaagtgtga
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