Oryza sativa japonica (Japanese rice): 9268807
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Entry
9268807 CDS
T01015
Name
(RefSeq) tryptophan synthase alpha chain
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00402
Benzoxazinoid biosynthesis
osa00999
Biosynthesis of various plant secondary metabolites
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
9268807
00999 Biosynthesis of various plant secondary metabolites
9268807
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
9268807
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
FMN_dh
IGPS
PcrB
Ribul_P_3_epim
NanE
TMP-TENI
ThiG
Motif
Other DBs
NCBI-GeneID:
9268807
NCBI-ProteinID:
XP_015633114
UniProt:
A0A0P0W4A5
Q7Y1J1
LinkDB
All DBs
Position
3:complement(join(34199019..34199153,34199258..34199395,34199510..34199587,34199690..34199766,34200143..34200686))
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AA seq
323 aa
AA seq
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MAFTVKASSPSSPATTRLTGALHGGAARVAARKLPAAAVAASLTLDRAPAPAGAERGMSS
SVSRTMSRLREKGKAAFIPYITAGDPDMGTTAEALRVLDACGADVIELGVPFSDPYTDGP
VIQASAARALAAGATMDGVMSMLAEVTPELSCPVVLFSYFGPIVRRGPANFTAAAKEAGV
QGLIVPDLPYVETSTFRSEAIKNNLELVLLTTPATPADRMKAITAASGGFVYLVSVNGVT
GSIQNVNPRVEHLLQEIKQVTDKAVCVGFGISTPDHVRQIADWGADGVIIGSAMVRQLGE
AASPKQGLKRLEKYARSLKDALP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacggtgaaggcgtcgtcgccgtcgtcgccagctacgacgcgcctcacgggt
gcgttgcacggcggcgcggcgcgggtcgcggcgcggaagctcccggcggcggcggtggcg
gcgtcgctgacgctcgatcgggcgccggcgccggccggcgccgagcgcgggatgtcgtcg
tcggtgtcgcggaccatgtcgaggctaagggagaaggggaaggcggcgttcatcccgtac
atcaccgccggcgacccggacatggggacgacggcggaggcgctgcgggtgctcgacgcc
tgcggcgccgacgtcatcgagctcggcgtgcccttctccgacccctacaccgacggcccc
gtcatccaggcctccgccgcgcgggcgctcgccgccggcgccacgatggacggggtcatg
tcgatgctcgcggaggtgacgccggagctttcctgcccggtggtgctcttctcttacttc
ggccccatcgtccggcgaggtccggccaacttcaccgccgcagccaaagaagccggcgta
caaggtcttatagtaccagatcttccttacgtagagacatccactttcaggagtgaagcc
atcaagaacaacctagagctggtgctgcttactacaccagctacaccggcagacaggatg
aaggcaatcacagcggcttcaggaggatttgtttatctggttagtgtcaatggggttaca
ggatctatccaaaacgtaaatccgcgtgttgagcatctccttcaggagattaagcaggtc
actgacaaagctgtgtgtgttggctttggcatatcaacccctgatcatgttagacagata
gcagattggggtgcagatggagtgatcattggcagcgcaatggtgaggcagttgggtgaa
gcagcttctcccaaacaagggctcaaaaggctggagaagtatgctaggagcctcaaggat
gcactaccatag
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