Oryza sativa japonica (Japanese rice) (RefSeq): 9268807
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Entry
9268807 CDS
T01015
Name
(RefSeq) tryptophan synthase alpha chain
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00402
Benzoxazinoid biosynthesis
osa00999
Biosynthesis of various plant secondary metabolites
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
9268807
00999 Biosynthesis of various plant secondary metabolites
9268807
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
9268807
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
FMN_dh
IGPS
PcrB
Ribul_P_3_epim
NanE
BtpA
ThiG
TMP-TENI
Motif
Other DBs
NCBI-GeneID:
9268807
NCBI-ProteinID:
XP_015633114
UniProt:
A0A0P0W4A5
Q7Y1J1
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Position
3:complement(33226455..33228559)
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AA seq
323 aa
AA seq
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MAFTVKASSPSSPATTRLTGALHGGAARVAARKLPAAAVAASLTLDRAPAPAGAERGMSS
SVSRTMSRLREKGKAAFIPYITAGDPDMGTTAEALRVLDACGADVIELGVPFSDPYTDGP
VIQASAARALAAGATMDGVMSMLAEVTPELSCPVVLFSYFGPIVRRGPANFTAAAKEAGV
QGLIVPDLPYVETSTFRSEAIKNNLELVLLTTPATPADRMKAITAASGGFVYLVSVNGVT
GSIQNVNPRVEHLLQEIKQVTDKAVCVGFGISTPDHVRQIADWGADGVIIGSAMVRQLGE
AASPKQGLKRLEKYARSLKDALP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacggtgaaggcgtcgtcgccgtcgtcgccagctacgacgcgcctcacgggt
gcgttgcacggcggcgcggcgcgggtcgcggcgcggaagctcccggcggcggcggtggcg
gcgtcgctgacgctcgatcgggcgccggcgccggccggcgccgagcgcgggatgtcgtcg
tcggtgtcgcggaccatgtcgaggctaagggagaaggggaaggcggcgttcatcccgtac
atcaccgccggcgacccggacatggggacgacggcggaggcgctgcgggtgctcgacgcc
tgcggcgccgacgtcatcgagctcggcgtgcccttctccgacccctacaccgacggcccc
gtcatccaggcctccgccgcgcgggcgctcgccgccggcgccacgatggacggggtcatg
tcgatgctcgcggaggtgacgccggagctttcctgcccggtggtgctcttctcttacttc
ggccccatcgtccggcgaggtccggccaacttcaccgccgcagccaaagaagccggcgta
caaggtcttatagtaccagatcttccttacgtagagacatccactttcaggagtgaagcc
atcaagaacaacctagagctggtgctgcttactacaccagctacaccggcagacaggatg
aaggcaatcacagcggcttcaggaggatttgtttatctggttagtgtcaatggggttaca
ggatctatccaaaacgtaaatccgcgtgttgagcatctccttcaggagattaagcaggtc
actgacaaagctgtgtgtgttggctttggcatatcaacccctgatcatgttagacagata
gcagattggggtgcagatggagtgatcattggcagcgcaatggtgaggcagttgggtgaa
gcagcttctcccaaacaagggctcaaaaggctggagaagtatgctaggagcctcaaggat
gcactaccatag
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