KEGG   Oryza sativa japonica (Japanese rice): 9269589
Entry
9269589           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    9269589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    9269589
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     9269589
SSDB
Motif
Pfam: RICTOR_M
Other DBs
NCBI-GeneID: 9269589
NCBI-ProteinID: XP_015614533
LinkDB
Position
10:join(3430160..3430336,3430418..3430591,3431328..3431423,3432368..3432437,3433606..3433730,3434856..3434996,3435090..3435247,3435372..3435531,3435624..3435722,3437864..3437941,3438054..3438113,3438201..3438358,3439614..3439818,3441484..3441603,3441835..3441920,3442024..3442134,3442264..3442335,3443181..3443266,3443458..3443606,3443835..3443978,3444063..3444170,3445337..3445441,3446571..3446678,3446801..3446905,3449252..3449424,3449664..3449858,3450132..3450375,3450880..3450987,3453195..3453253,3454677..3455061,3455394..3456932,3458254..3458461,3458598..3458698)
AA seq 1968 aa
MASGGASSAPATASTPAAAAATTTTSKTASASLWWDPFIDLSDDLDRAAAASPSVPDALA
ERIKAHHAWLRGSVSMFVKPSDASRGALDASEVVVGEHRLAVKPELKAAALRLSKCMNLD
EVQSYILVKRTSENTPTALVADTEEFLRLVSVQYYLERQCLLKCIRRIFVHANDCSDSID
AVREEASVLVREEVEQRLLSIVRDSLASAFSVKGGAELTISWLEETLIEINLIFDILFLF
FYDNLSRCNGGLWIMLCSIFKDMLSGSYDVGKFAVSVEAKNSFHYAKAQLLFILIQTLDF
ESLLRMVRDEVPFSGGYSTFSVVDILEMDVEVSKLPEFAAVESGPLILAWAVFLCLVMSL
PGSNTNLDIDHTSYAQRSFEFAPFNYLQGVLCSSIFKESDGPVSGFRGILRTFISAFVAS
YEISYQTEDSSLGMILNILCEVYDGEESLCMQFWDKDSFIDGPIRSILHMVEKEYPFQIS
ELIRFLSAVCHGSWPAQCVFNYLERMNGVTTLYAVPRSDTDNVNYHDQIEIHSPISIFGI
EGTTIPGGSHGYILKVLEDDVALVRWEFPHSGVLFLLVILAQDLHACNYEEACAIMDLLY
KMVSSNRDLCLALLHADKSLAVQASQNLGYIDKHVRIDIAKIFCTSIFKYVEDFNNACVM
SKTLGMLAEMLSCVPYHVFNVALDCGFFITQSGVASSDWLLSGALARMLFATSEDSGDCS
SLTTTVLDFAIQVLRKGAAADDIISSFIIFSVQYIMVNHMNWKYKSYSRWKITLKVFDLV
KSCIQVKSFSSKLGGIIWEILLYDSSIHSVLLHILSMSTQLLEHSHGSYCHDLKDIEDIQ
LVLCCGFDIVFYMLSNLPEELVPSPPFVTMVLSSSSKPLPFVTAAISLMSFQNSAIQVAA
ARVFSMLCFTAYKAQPQLMENAYFVVNGSEIWRLQTSISCILDEVDKVNEVVAIFNLLSS
AARYQPALLISLIEQSTRAQADSDNSAHEQSSKYFVLNPSGSNPRLVEQILGYIGRSTEL
MDRSPSILSGVLDLLKALWESGAQFIYILEKLRSSRTFWENLSCCIRAAFASYPIDSVET
VDEKKSLRYCCLGTIFEIMSYELFLQGKLLTETKTSDPAPVGSKEQKEPSVAPCPSDIVL
KWFDSTTMEDLVNHLSSNGYQNDLLHRAKVASCLCIIRLLTKLSSGDTGSLSFSLVKKIQ
LISSKLLQHRAFVALLSQYALHGYSGEQDITNLIISDLYYHIHGELEGRPITPGPFQELL
CFLLEFKVFEHNPSEQLQKSFPAANGVSLFDVPHIRDELGLELWNHSDWKTYKEVAEKML
DIMHKANLMKCQVDAKLCALRSFITFLSVCTGTSSYKKFGLPGGGISITTTQSAVRCACK
SLQSAVDSLPPEVDNSGVLFPPLSGQVELLLTITRILLDHAKQSKSSRHLYPVIVLLMKT
SGASTSFLFNLMPSSPALKQPVKSLLVLLLSLFEFIYKKVDMKDGSEDVNIFGELSLLSM
SLLPVLCKLAESREYFDLAIASMDIILKGFLPSNVWVPILQKHFRLQVILQKCQSGALLC
TQVILNFLLTMGRTKDGAKILQSANIFAFIKVLLSQMSLDDSCLRNSLSTQTKDVKIWGL
GLAIVSSLNHCMDDDISRNSVANSTISFLSGQVPLMSSYLSAQSVNTHQSKKRTLLQKSQ
TSLSALSLTENILTLLCILAKYHFPRDTGMKEVDSELREIIIHLLAFISRGSERTGDSPN
WNLSFGCPPIIKEEMKLNEEPPLIRSKYGWFRFAASCTLSTPSVSGPPNAGLSLVIRDKN
PADSDSMKQTRFTEMLAVQIYRIAFLIMKFLCSQAKEAVRRAEELEFLDLAHFPELPMPD
ILHGLQDQVVSIVTEVLEANVSTALNTETERVCQLLLVILETSLYMELCVSQSCGIRPVM
GRFEDFSKGIKAMVHASEKHSSFKPLVRSLAQITTLLYPGIVQNNNLM
NT seq 5907 nt   +upstreamnt  +downstreamnt
atggcgagcggcggcgcctcctccgccccggccaccgcctccacccccgccgccgccgcc
gccaccaccaccacaagcaagaccgcgtccgcctcgctgtggtgggacccgttcatcgac
ctctccgatgatctcgaccgcgccgccgcggcgtccccttccgtcccggacgccctcgcg
gagcggatcaaggcccaccacgcgtggctccgcgggtcggtgtccatgttcgtgaagccg
agcgacgcgtcgaggggcgcgttggatgcctccgaggtggttgttggggagcaccgcctc
gccgtcaagcccgagctcaaggcagccgcgcttcgcctgagcaagtgcatgaacttggat
gaggtgcaatcgtacattctggttaagagaacttcagaaaacactccaacagctcttgtt
gctgatactgaagagtttcttcgcctggtatctgtacaatattacctggagcgtcaatgc
ttgctgaagtgcatccgaagaatctttgttcatgcaaatgattgttctgattcaattgat
gccgttagagaagaggcctcagttttagttagggaagaggtggaacagagactactatcc
attgttcgagattcccttgcatctgcattctctgtcaaagggggagctgaattgacgatt
tcttggctggaagaaacactgattgaaattaacctgatttttgacatcttgtttcttttt
ttctatgataacctttcaaggtgtaatggtggactgtggataatgttgtgttcgattttt
aaggacatgctatctggttcttatgatgttggaaaatttgctgtatctgttgaagcaaaa
aattcgtttcattatgctaaagctcagctgctgtttattctcattcaaaccttggacttt
gaaagtctactccggatggttcgtgatgaagttccttttagcggagggtattccacattt
tctgttgttgatattcttgaaatggacgtcgaagtatcaaaattacccgaatttgcagca
gtagaatcaggaccacttattcttgcttgggcagttttcctttgcctggtcatgtccctt
ccaggaagtaataccaatttggacattgatcatacatcttatgcccaacgctcctttgag
tttgctccattcaattatctacaaggagttctgtgctcaagcatcttcaaggaatcagat
ggtcctgtttctggttttcggggtatattgagaacattcatttcagcatttgtggcttca
tatgagatctcttatcagacagaagatagttctcttggcatgattttaaatattctatgc
gaagtttacgatggagaggaatctctctgcatgcaattctgggacaaagatagttttatt
gatggtccaatcaggtccattcttcatatggtagaaaaggagtatcctttccagatatca
gaattgattcgcttcttatcagccgtttgccatgggagttggcctgctcaatgtgtattt
aattaccttgagaggatgaatggggtgactacgttgtatgcagtccctaggagtgataca
gacaatgtgaactatcatgatcaaattgaaattcatagtccaatcagcatttttggtatt
gaaggaactacaattcccggtggaagccatggctacatcttgaaagttcttgaagatgat
gttgcattagttcgctgggagtttccacattcaggtgtcctctttttgcttgtaattttg
gcacaagatcttcatgcatgcaattacgaggaagcttgtgctataatggacctactatat
aagatggtatcatcaaacagggatttgtgccttgctttgctgcatgctgacaagtcgcta
gctgtccaagcgtcacagaacttggggtatattgacaagcatgtcaggattgatattgct
aaaattttttgcacatccattttcaaatatgtggaagattttaataatgcttgtgtaatg
tccaaaacccttggcatgctggcagaaatgctcagttgtgttccataccatgtgttcaat
gtggcgttggactgtggcttcttcattacacaatctggtgttgcttcaagtgattggctt
ctttctggtgcgctagcaagaatgctttttgctacctctgaggatagtggagactgttct
tcacttacaactacagtgcttgattttgccatccaggttttgcggaaaggagctgctgct
gatgatataatatcatcattcattatattttcagttcaatacatcatggttaatcatatg
aactggaaatacaagagttatagtcgctggaagataacccttaaggtgtttgatttggta
aagagctgtattcaagtcaaatcattctcatcaaagcttggtggcatcatttgggaaatt
ctattgtatgattcttctatccacagtgttcttttgcatattttgtccatgtcaacgcaa
ttactggaacactcgcatggcagctattgtcatgatcttaaggatattgaagatatacag
cttgtcctttgctgtggatttgatattgtattttatatgctgtccaacttaccagaggag
ttggttccaagtccgcctttcgttactatggttttgtcgtcctcgtcaaaaccattgcct
ttcgtcacagctgcaatatcattgatgtcctttcagaattcagctatacaagttgcagcc
gctagagtattttcaatgctgtgcttcactgcttataaagcacaacctcaactcatggaa
aatgcctactttgttgttaatggttcagagatttggagactgcaaacaagtatttcctgc
attcttgatgaggtagacaaagtcaatgaggttgttgctatattcaaccttctgtcttct
gctgctcgttatcagcctgctcttcttatttccttgatagaacagagtacaagggcgcaa
gcagattctgataattccgctcatgagcagagcagtaaatattttgttctgaacccttca
ggaagcaatcctagacttgttgagcaaatcttgggttatattggacgatccactgagctt
atggatagatctccttctatattatcaggtgttcttgatctactgaaggcattatgggaa
agtggtgctcaatttatatacattttagagaaactgagaagttctagaacattctgggag
aacttatcatgctgtattcgtgctgcttttgctagttaccctatcgacagcgttgagact
gttgatgaaaaaaaatctttgagatattgttgtcttggtacaatttttgagatcatgtca
tatgagttgttcttgcaaggaaagttgcttacagaaacaaaaacttctgatcctgcccct
gttggttcaaaggagcaaaaagaaccttctgttgcaccttgtccaagtgacatagtgctc
aaatggtttgatagcacgactatggaggatttggtaaatcatctatcaagtaatgggtac
caaaatgatcttcttcatcgtgctaaggtagcatcctgcctttgcattatccgtctatta
acaaagctgtccagtggtgatactggaagcttgtcattctcgctagtgaagaagattcag
ctcatatctagtaaattgttacaacaccgtgcatttgtagctctactgtcacaatatgcc
cttcatggttacagcggtgaacaagatattaccaatttgataattagtgatctttactat
catatacatggagaactcgaaggtcgtccaattactcctggtccgtttcaggagctgcta
tgcttccttctagaatttaaagtttttgaacacaatccttcggagcaactacagaaaagt
ttcccagctgccaatggcgtttctttgtttgatgttcctcacatacgtgatgaacttggc
cttgaactttggaatcattcagactggaagacttataaagaagtagctgaaaagatgctg
gatatcatgcataaagcaaacctgatgaaatgtcaagttgatgcaaagctttgcgcgttg
aggtcattcataacatttctgtcagtatgcactggaacaagttcatataagaagtttggc
ttacctggtggagggatttcaataacaactacacaatcagcggttagatgtgcatgcaaa
tctctgcagtcagctgttgactccctccctcctgaggttgataacagtggggttttgttt
cctcccttgtctggacaagtggaattgttgcttactatcaccaggatcttacttgaccat
gctaaacaaagcaaaagttcaaggcatctttatccagttattgtactactcatgaaaact
tcaggtgccagcacttcctttttgtttaatctcatgccatccagtcctgctcttaagcaa
ccagtgaagtccctccttgttctgcttttgtcattatttgaattcatttacaagaaggtt
gacatgaaagatggatctgaagatgtcaatatatttggggagttatcccttttaagtatg
agcttgttacctgtattatgcaaattggcagagagcagagaatattttgatcttgctatt
gcatcaatggacataatattgaaaggctttttgccttctaatgtatgggtgcctattcta
caaaagcattttcgtctccaggttatactgcaaaagtgccaaagtggggctttattgtgt
actcaagtcatattgaatttcctcttgactatggggcggacaaaggacggtgctaaaatt
cttcagtctgccaatatttttgctttcataaaggtccttctgagtcagatgtctttggat
gactcctgtttgagaaattccttgagcacccaaacaaaggatgtgaaaatttggggtttg
ggtcttgctattgtctcctctttgaaccattgcatggatgatgatatttcccgcaacagt
gttgcaaacagtactatcagcttcctttcagggcaagtgcctttgatgtcgtcttatcta
tctgcacaaagtgttaacactcatcagagcaagaaaaggacactgttacaaaagtcacag
acatcactttcagctctcagtcttactgagaatattctcacacttctctgtattttggcc
aagtaccatttcccacgggacacaggtatgaaggaagtagattcagaattaagggagatt
attatccacctgcttgcatttataagcagaggtagtgaaagaaccggtgattccccaaac
tggaacttatcctttggttgtcctcctattattaaagaggaaatgaagcttaatgaagag
ccaccacttattaggagcaaatatggatggttccgatttgctgcaagttgtactttgtca
actccatctgtctctggtcctcccaatgcaggattgtcacttgtgattagagacaaaaat
ccagcggattctgattctatgaagcagactcgttttacagagatgttagcagtacaaatc
tataggattgcttttcttattatgaagttcctatgcagtcaagcaaaagaggcagtaaga
agggcagaagaactggagttccttgaccttgctcatttcccagaacttccgatgccagat
attcttcacggcctgcaggatcaagtggtttctattgtcactgaagtattagaggcaaat
gtatctactgcactcaataccgagacagagagggtgtgccaacttctgttggtgatactt
gaaacatcactttacatggaattgtgtgtatcccaatcatgtggcatcagaccagtgatg
ggtcgttttgaagatttctccaagggaattaaggctatggttcatgcttctgagaagcat
tccagttttaaaccattggtcaggtcacttgcccaaattaccactcttctttatcccggg
attgtacaaaataacaatctcatgtaa

DBGET integrated database retrieval system