Oryza sativa japonica (Japanese rice): 9269670
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Entry
9269670 CDS
T01015
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
9269670
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
9269670
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Structural polysaccharide
9269670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
9269670
NCBI-ProteinID:
XP_015651233
LinkDB
All DBs
Position
9:complement(join(22601381..22601624,22602189..22602343,22602432..22602636,22602719..22603008,22603109..22603274,22603359..22603447,22603554..22603621,22604032..22604353))
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AA seq
512 aa
AA seq
DB search
MRRGGVKAAAAAEKAREAARAKVWAARASTTVVLWLCCALLLATSRELGRWSGCLTQPLI
VVERRFEAVAAAGSERAAASASAAAAARGERAESSASEAAVAALPPKRIYKNNGYLMVSC
NGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYFISSLRDEVR
ILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQILPLIRKYKIVHLNKTDARLANNGL
PMEIQKLRCRVNFAALRFTPEIEELGRRVVRILRRNGPFLVLHLRYEMDMLAFSGCTHGC
SNEEAEELTRMRYAYPWWKEKVIDSNAKRNDGLCPLTPEETAMVLKALDIDSSYQIYIAA
GEIYGGQRRMSALTSAYPNVVRKETLLPSDLRFFQNHSSQMAALDYIVSLESDIFIPTYD
GNMAKVVEGHRRYLGFKKTVLLDRKLIVELVDQYKNGTMRWNHFSSAVKASHSSRMGAPS
RRQMIPDKPKEEDYFYANPHECLHQPEELSVL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggggcggggtgaaggcggcggcggcggccgagaaggcgcgggaggcggcgcgg
gcgaaggtgtgggcggcgcgggcgagcaccaccgtggtgctctggctgtgctgcgcgctg
ctgctcgcgacgtcgcgggagctcgggaggtggtcgggctgcctcacccagccgctgatc
gtcgtagagcgccggttcgaggcggttgccgccgcgggcagcgagagggcggctgcatca
gcatcggcagcggcagcggcgcgcggcgagagggcagaatcatcagcatcggaagcggcg
gtggcggcgctcccgccgaagagaatctacaagaacaatggctatctgatggtctcctgc
aacggtgggcttaaccagatgcgagcagctatatgtgatatggtgacgattgcaagatac
ctgaacgtcacccttatcgtcccagaactggacaaaacttcattttgggctgatcctagt
gagttcaaggatatatttgatgtggattacttcatatcatcattgagagacgaggttcgg
atactgaaagagctgcctccaaggctgaaaagaagagttgaactgggatatgttcgctcg
atgccacctgtcagttggtctgatatatcttattaccaaaatcagattctaccactgatt
aggaagtacaagatcgttcatctgaacaaaactgatgctcgccttgcaaataatggccta
cctatggagattcagaaattgaggtgccgtgtcaattttgctgcattgagatttacccct
gagatagaagagctgggtaggcgtgtggttcgaattcttcgtcgtaatggcccttttctg
gttcttcacttgcgatatgaaatggacatgctcgcgttctctggttgcacacatggttgc
agcaacgaggaggctgaggagctcacaagaatgagatatgcttacccatggtggaaagag
aaggtgattgactcaaatgcaaagaggaacgacgggctctgtccattaacaccggaggag
actgcaatggtattaaaggcactagacattgatagcagttatcaaatatacattgccgct
ggtgaaatatacggtgggcaaagaagaatgtctgcccttacctcagcttatcccaatgtg
gtgagaaaagagacattattgccttcagatctcaggtttttccagaaccattcctcccag
atggcagcattagattacattgtatccttggagagtgatatttttatccccacttatgat
ggtaatatggcaaaagttgttgaaggtcatcgcagatacttgggcttcaagaagactgta
ctgctagataggaagcttatagttgagctcgttgatcagtacaaaaacggcacaatgaga
tggaaccatttctcctccgctgtgaaggcgtcgcatagcagccgcatgggcgcgccatca
aggaggcagatgattcctgacaaacctaaggaagaagactacttctatgcaaatcctcat
gagtgtttgcaccaaccagaagagctatcagttttgtga
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