Oryza sativa japonica (Japanese rice): 9270000
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Entry
9270000 CDS
T01015
Name
(RefSeq) cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
9270000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
osa01007
]
9270000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
9270000
Enzymes [BR:
osa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
9270000
Amino acid related enzymes [BR:
osa01007
]
Aminoacyl-tRNA synthetase
Class I (G)
9270000
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
9270000
Prokaryotic type
9270000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
GCP_C_terminal
DALR_2
PXA
YonK
VBS_C3G9
tRNA_lig_CPD
DUF7118
Tra1_central
DUF5662
TFIIA
Ndc1_Nup
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
9270000
NCBI-ProteinID:
XP_015632797
UniProt:
Q10RX2
A0A8J8YCC8
LinkDB
All DBs
Position
3:complement(join(2405870..2406082,2406188..2406370,2406472..2406675,2406791..2406916,2407007..2407288,2407369..2407539,2407871..2408032,2408544..2408607,2409083..2409264))
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AA seq
528 aa
AA seq
DB search
MAESAKPTPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLY
RYLKFLGYEVEYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCE
PRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVD
TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIF
PHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFF
LMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPVEEQDMVNK
HHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQ
QQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAGLTEELLQE
QIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPCEPESE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcgcgaagccgacgccgcagctggagctcttcaactcgatgacgaagaag
aaggagctcttcgagccgcttgtggaggggaaggtccgcatgtatgtgtgcggcgtcacg
ccctacgacttcagccacatcggccacgcccgcgcctacgtcgccttcgacgtcctctac
aggtatcttaaattcttggggtacgaggtcgaatatgtgcgcaacttcactgatattgat
gacaagattatcaaacgagcaaatgaagctggtgaaactgtaactagcttgagcagccgg
tttattaatgaattccttctcgatatggctcagctccagtgcttacccccaacttgtgag
ccacgtgtgacggatcacattgaacatattatagagttgataaccaagataatggagaat
gggaaagcctatgctatggaaggagatgtttacttttcagttgatactttccctgagtat
ctcagtttatctggaaggaagttagatcataatcttgctggttcgcgggttgctgtcgat
acaagaaagcggaaccctgcagactttgcgctgtggaaggctgctaaggaaggcgaacct
ttctgggatagcccatggggccgtggtagaccaggatggcatattgaatgcagtgcaatg
agtgctcattatttaggacatgtgtttgatatccatggtggagggaaagatctgatattt
cctcatcatgagaatgagcttgctcagagccgggcagcttatccagaaagtgaggtcaaa
tgttggatgcacaatgggtttgttaacaaggatgatcagaaaatgtcaaagtcagataaa
aatttcttcacaatccgagatattattgatctgtaccatcccatggctttgaggtttttc
ctgatgcgcacacattacagaggagatgtgaatcactctgacaaagcacttgagatagca
tctgatcgtgtctactacatatatcagactttatatgactgtgaggaagtgttgtctcaa
tatcgtggagagaatatctctgtcccggtccctgttgaggaacaagatatggttaacaag
caccattcagaattcttggaatctatggcggatgatcttagaacaacagatgttctggat
ggctttactgacttgctgaaggcaattaacagcaatttgaatgattttaagaagttgcaa
cagaagctagagcagcaaaagaagaaacaacaacagcagaagcagcagaagcaaaagcag
cagcaggcacagaaacaaccagaagaatatattcaagctatgtttgcacttgagacagaa
attaaaaataaaatatctatccttggtctgatgccaccttcttccttggcagaggcactg
aagcaacttaaggataaagctttgaagagagcagggttgactgaagaactgttgcaggag
caaattgagcagagaactgctgcaaggaaaaacaagcagtttgatgtgtctgaccaaatc
aggaaacagctaggcagcaaaggcatagccctcatggatgaacctactggtacagtatgg
agaccatgcgagccagagtctgaatag
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