Oryza sativa japonica (Japanese rice): 9270364
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Entry
9270364 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
9270364
Spliceosome [BR:
osa03041
]
Common components
Common spliceosomal components
General mRNP proteins
9270364
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
9270364
NCBI-ProteinID:
XP_015629888
LinkDB
All DBs
Position
3:complement(join(2932075..2932110,2932191..2932305,2933607..2933695,2933831..2934050,2935082..2935146,2935780..2935863,2935966..2936040,2936118..2936204,2936365..2936578,2937804..2937859,2938052..2938108,2938204..2938276,2939872..2940386))
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AA seq
561 aa
AA seq
DB search
MDFDEYDYLEKTVEGSGAPSNGAAAPRSEEKERSSRRRSGGGGGGDEERDDGERRSKRSR
SEENRDRDKDKDRDRHRDRDKDRDRHRSSRERRDRDRDRDRDEKDREKERDKDKERRSRD
REKEKEKEKEREREREKDRERRSRSRSERRRDDEERDRERYRERDYRDRDVRRRKEEAGE
PEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD
VMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNITE
DQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKV
SAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTAGIAGTGLN
TSVGLPPASVLGAPPVAASVLPTVPGLGSVPGVSLPITTQAIETAPPSECLLLKNMFDPS
VETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHGRWF
AGKMITATFMSPQQYSTKFPS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgactacttggagaagacggtggagggctccggggcgccgtcc
aacggcgccgccgcgcccagatccgaggagaaggagcgaagctctcgccgccggagcggc
ggcggcggcggcggcgacgaagagcgcgacgatggcgagcgcagatccaagcgctctcgc
tcggaggagaaccgcgaccgcgacaaggacaaggaccgggaccggcaccgcgaccgcgac
aaggaccgggaccggcaccgcagcagccgggagcgtcgcgaccgcgaccgcgaccgagac
cgggacgagaaggatagggagaaggagagggacaaggacaaggagaggagaagccgggac
cgcgagaaggagaaggagaaggagaaggagagggagagggagagggagaaggatagagag
cggaggagccggagccggtccgagcgccgccgcgacgacgaagaacgtgaccgcgaacgc
taccgcgagcgagactaccgtgaccgcgatgtcagacgtaggaaagaagaggctggagag
cctgaagcagatccagaacgagatcaaaggacagtatttgcctaccagttatctctgaag
gcggatgaaagagacgtgtacgaattcttttcaagggctgggaaggtccgggatgttcgc
ctcatcatggaccgaaactcgcgccgttctaaaggagttgggtacatcgaattctatgat
gttatgtctgtaccaatggcaatagctctttctggccagctgcttcttggtcaacaggtg
atggttaagccatcagaggctgaaaagaatttagttcagtcaaatgcttcttcaagtgga
gcagcttcaggtggggcaagaaagttgtatgttggaaatcttcactcaaatattactgaa
gatcaattgagacaggtcttcgaaccgtttggtcaggtggagcttgtccaattgccacta
gatccacttactgggttatgtaaaggttttggttttgttcagtttgcacgccttgaagat
gcaaaggctgctcagagtttaaatgggcaacttgatatagctggacgtgtgattaaggtt
tctgctgtgacagaccaagcaggagttcaagtcagtggagtaactactggagatttggat
gatgatgaaggtggaggtttggcactgaatgctagttcaagagctcttttgatgcagaaa
ttagaccgtagcggcgttaccaccagtttgactgctgggatagccggtactggtttgaac
acttctgttggattaccacctgcatcagttcttggtgctcctccagtcgctgcatctgta
ctgcctacagtgcctggtcttggttcagttcctggggtgtctcttccaattactacccaa
gccattgagacagccccacccagtgaatgcctattgcttaaaaatatgtttgatccatcc
gtggagacggaccctgattttgatttggatatcaaagatgatgtccaagaagaatgctcc
aagtttggccaagtaaaacacatttttgtggacaagaatacttctggctttgtgtacctt
cgatttgacagtataacagctgccatgagtgcacagaaagcacttcatgggaggtggttt
gcgggaaagatgattacggcaacatttatgtctccgcagcagtactcaacgaagttcccg
agctag
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