Oryza sativa japonica (Japanese rice) (RefSeq): 9270457
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Entry
9270457 CDS
T01015
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9270457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
9270457
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
9270457
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
9270457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF3134
Motif
Other DBs
NCBI-GeneID:
9270457
NCBI-ProteinID:
XP_015614312
LinkDB
All DBs
Position
10:complement(18857788..18869422)
Genome browser
AA seq
1174 aa
AA seq
DB search
MAAGKSSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRI
SLEKGHLFPPKRDGRLDAPLYPQQCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLP
IMLMSKLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSF
VNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALID
TSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYF
RSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADA
LQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAY
VGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTS
VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLV
GAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLE
VGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGG
DGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFR
TDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDR
GMFRGHIFQTECIDLSAKSRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYS
VCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHG
QKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDA
TPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRH
MVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDY
HIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPY
VFRYLASELAAMNIKLELRLSNRTEHPTTTSEES
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggaagagctcgtcggcctccaaggaggaccagtacgcggcgctgcgggag
ctgtaccggccgcacatcgactcgttcgactacttcatcgacgaggggctcgacaagatg
cttcagtccatccgccccgtggagatcaccgtccccaactcccccaccaccctcagaata
tccttggagaaaggtcatctgttcccaccaaagagggatggtcggttggatgcaccgctc
tacccccagcagtgcaggcaggcacggacgacgtatcatggggaatttaaagtggatact
ttcatccaatgtaatgacggaccagctgtcaggcaaaccttcaattttggttacttgcct
attatgttaatgtcaaagctttgccatctaagaggtgcagattctgaaaaattgattttc
catggtgaagaggcaacagaaatgggcgggtacttcatatgtggtgggatggagagactt
gtacggattcttattttacaaaaacgtaactatcctatgggcctgatccgtggctctttc
gttaatcgtggtgctgggtacactgacaaagcagtgatcataagatgtgtccaagatgat
cagtccagtgtgacaataaagctgtattacctcctaaatggcagtgcaaggcttgggttc
tggttgggaggcagagaatttctccttcctgttgggattgttctcaaggccctaattgat
actagtgaccgggaaatatttacaagcttgacatgctgctacagtgatcattatgaaaga
ggaaagggagttgtcagcactcaacttattggtgaaagggcacaaataattcttgacgaa
gtcagagacctgtctctttttactcgcacagaatgcttgttgcatcttggaaagtacttc
cgatctgtgatggaaggatttgagaaagatgattttgaaactgttgctgaggcagttctt
aaggactatatttttgttcacctgcaaaacaaccatgacaaatttaatttattgatattt
atgctgcagaaactttatgcgattgtagatcaaactgcgtcacctgataaagctgatgct
ctacagtaccaggaagttctcttgcctggccacctgataacagtttttctaaaggataga
cttcaagattggttgagaaagtccaaacggttaattgttgaagaggctacaaaaaataaa
agctttgatctcaatgactcacaggaggtcaggaaatttctcagtaaaacttcagcatat
gttggcaaagctattcagagtatgataaaggtcggaaaagtaaattcacaatcagggcta
gatctgccacagcgagatgggatgaccattcatgctgaacggctcaactttcatcgttat
atttcgcatttccggtctgtgcataggggttctagttttgctaaaatgcgtacgacatct
gtgaggaagttgcttccagagtcatggggtttcctctgtcctgttcatacacctgatgga
gagccttgtggtttactgaaccatatgacttccacatgccgtatttcatccttttacaac
tcagaaggggcaactaaagattttcagaaaataaagatgtcacttattgctcgtttggtt
ggcgctggaatggcccaactgttgccgaggatagagcgaactggtcctccagaagtccta
catgtccatgtggatggatgcattgttggttccatcgcttctgctaagattgaagaagta
gtaaatcatcttagaagtttaaaattgcttccacattcagggattccagaggatttggaa
gtgggttatgtacccttaagccatggtggggcttatcctggactataccttttcaccaat
ccagctagatttcttcgtccggtcagaagtctcttaggtctatccaatggagggccaaat
attgagctgattggaccatttgaacaggcattcatggaaatacgatgccctgatggtggg
gatggtggaagaaacaaattatttcctgcaactcatgaagaaatccaccctacagccatt
cttagtgtagttgcaaatttgacaccttggtctgatcacaatcaaagtcctcggaacatg
taccaatgtcagatggcaaagcaaaccatgggattctgtggccaagctctaaaattccgt
actgatgtaaaagcatttcatctacagacccctcagacaccaattgtccggacagctaca
tatagcaagtattgcatggatgagttcccatccggaacaaatgctattgttgcggtgcta
tcatacacagggtatgatatggaggatgccatgattttgaataaatccgctgttgatcgt
gggatgttccgtgggcatattttccagactgagtgcattgatttatcagcaaaaagtaga
gataatgttacggagttcttttgcaagagtaatctttcgagggacactaccgctgcaatc
gaatcagatggccttcctcggattggagagaacatatttccaaatgagcagtactacagc
gtctgtaacaatctcactggtacagtaaggcctatcaaactgaagggctcagaacctgca
gctattgattatgttgctgtcaatgggacaaattttaaggatcgtctacaaaaggctaat
attcgtctgcgtcgcgtgagaaatcctataattggtgacaagttcagcagcagacatggt
caaaagggagtttgttcgcagttgtggcctgatattgatatgccattctctgctaatact
gggatgaggccagatctcatcattaatccccatgcatttccttcacgaatgactatagca
atgctcttagagtcgatagcagcaaaggccggaagtctgaaagggaagttcattgatgca
acgccttttgcaagctcagttaaagagagatcaaattccattgtggatgaactgggaccc
atgcttgcttcttatggatttaattaccatggaacagaaattctatatagtggagttttt
ggcactgagatgaaatgtgagattttccttggacctgtatactatcaacgccttcgtcat
atggtctcagacaaatttcaggttcgtaccacagggcgaatagatcagatcacaagacag
ccaataggaggaaggaaatacggtggagggattcggttcggtgagatggagcgagacgcg
cttctcgctcatggtgcctcttacctcctacatgacaggctccattcctgctccgactac
catatcgcggacgtgtgctccatctgcgggagcttgctgacggcgacggtgatcaaatcc
gaaagccagaagaaagccaagcgcgacatgctcgggctccccaccgtaaaacctcccaag
aactttgcctgccaggcctgcaaaacaagcaaagggatggagaccgtcgccatgccttac
gtcttcagatacctggcctccgagttggcggccatgaacataaagttggagcttcggctc
agcaatagaacagagcatcctactactaccagcgaagaatcctga
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integrated database retrieval system
