KEGG   Oryza sativa japonica (Japanese rice): 9270745
Entry
9270745           CDS       T01015                                 
Name
(RefSeq) transportin MOS14
  KO
K15436  transportin-3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
osa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    9270745
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9270745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    9270745
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    9270745
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_3rd IBN_N Exportin-5 Importin_rep_3
Other DBs
NCBI-GeneID: 9270745
NCBI-ProteinID: XP_015614805
UniProt: B9G693 A0A8J8YNT1
LinkDB
Position
10:join(18525476..18525604,18526548..18526625,18526728..18526790,18527068..18527115,18527435..18527581,18528496..18528627,18529137..18529177,18529331..18529422,18531201..18531328,18532151..18532226,18532343..18532463,18532532..18532631,18532723..18532804,18532896..18532978,18534210..18534320,18534492..18534543,18534937..18535092,18535360..18535483,18535578..18535659,18535737..18535825,18535900..18535974,18536070..18536124,18536709..18536828,18536903..18536995,18537102..18537247,18537385..18537562,18539109..18539396)
AA seq 962 aa
MEAQATAAVKEALAALYHHPDDATRTAADRWLQQFQHTLDAWQVADSLLHDESSNMETQI
FCSQTLRSKVQRDFEELPSEAFRPLQDSLYALLKKFSKGPQKVRTQICIAMAALAVHVPV
EDWGGGGIVNWLSDEMNSQQDFIPSFLELLTVLPQECSSHKIAARPERRRQFENDLRSSA
EVALSLLTACLGIDQLKEQVLEGFASWLRFCHGISASNLASLPLVYTALSSLNSDQFLEA
AVNVTSELIHFTVSRESNGITEQLPLIQVLIPYVMGLKEQLKDSSKDEEDVKAIARLLAD
MGDSYVELIAAGSDDAMQIVNALLEVTSHSEFDISSMTFNFWHHLMRNLTDRGSYASYGS
EVSINTERNRRLQLFRQPFEILVSLVSFRVEYPELYHTFSEEDQRDFRHSRYAVSDVLLD
ATDVLGGDPTLKILFTKLIQACGNGQNQKWQPVEAALFCIQAIAKSVSVEENEILPQVMS
LLPSFPHQEQLLQTVCSLVGAFSKWIEAAPSELLILPPLVDILNKGMSTSEETAAAASVA
FKYICEDCRRKFSGSLDGLFQIYQIALSGVGGYKVSSEDSLHLVEALSVVITTLPPDHAQ
RALELICQPVINPLQEIIQQGDTVLQQVPVRQLTLHIDRLSCIFSNVKLPQVVADAVNRY
WPTLKSIFDQRAWDTRTMESLCRSCKFAVRTCGRFMGFTIGAMLEEIQTLYQQHNQACFL
YLSSEVIKIFGSDPACANYLASLIQALFGHTIQLLRTIQDFTARPDIADDCFLLASRCIR
YCPDLFVPTEMFPRLVDCAMVGITIQHREACKSILSFLSDVFDLAKSPEGEKYRELINTV
ILQRGAVLTRIMVASLTGALPSSRLEEVSYVLVSLSRSFGGNMLSWARECITLIPPQALT
DSERSRFLNIISDASSGSSLGSITDRFAEISEVCRRNKTVQDIVQGALRPHDLSFTVAPP
PL
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggaggcgcaggccacggcggcggtgaaggaggcgctggcggcgctgtaccaccacccc
gacgacgccacgcgcaccgccgccgaccggtggctgcagcagttccagcacacgctcgac
gcgtggcaggtagctgacagcttacttcatgatgaaagtagtaatatggagactcaaatc
ttctgctctcaaaccctcagaagcaaggtacaaagggactttgaagaattaccttcagaa
gctttccgtccgctacaagattctctatatgcattgctgaaaaaatttagtaaagggcca
caaaaagttagaacacagatttgcattgcaatggctgctcttgcggtgcatgtacctgta
gaggactggggaggtggtgggattgtgaattggctaagtgatgaaatgaactctcaacaa
gactttatcccaagcttccttgagctgctaactgttttgccacaggaatgttctagtcat
aaaatagcagctcgtcctgaaaggcgccgacagtttgagaatgaccttcgttcatcagcc
gaagttgcacttagtctattgactgcttgcttgggtattgatcaactgaaagaacaggtt
ctggagggttttgcttcttggcttcgtttttgtcatggaatctccgcatctaatcttgct
tcgcttcctttggtctatacggcactttcttcgttgaactctgaccaatttttggaggca
gctgtaaatgttacttccgaattgatacattttacggtatctcgagaatctaatggcatc
accgaacagcttccactgattcaagttctcattccttatgttatgggtcttaaggagcaa
ctcaaagattcatcgaaggatgaagaagatgtaaaagctattgcccgtttgttggcagac
atgggtgattcttatgttgagttgattgcagcaggttctgatgatgccatgcagatagtg
aatgcattactggaagttacttctcattcagaatttgacatttcctccatgacatttaat
ttctggcatcatcttatgcgtaacctgaccgataggggttcgtacgcatcatatggatct
gaggtctcaatcaacactgagaggaatagaagattgcagctatttcgtcaaccttttgaa
attcttgtttctctggtaagtttccgagttgaatatcctgagctctaccacaccttttcg
gaggaagaccaaagggatttcagacattccagatatgcggttagtgatgtattacttgac
gcaactgatgttcttggaggtgatccgacgctgaaaatacttttcacgaagctgattcag
gcatgtggaaatggacagaaccaaaaatggcagcctgtcgaggctgcgctgttctgtata
caagccattgctaagtcagtctcagttgaagagaatgaaatactaccacaggtcatgtca
ctgcttcccagctttcctcatcaagaacagttgctgcaaacagtttgttcactcgttgga
gcattttcaaaatggattgaagccgcaccatctgaactgttgatactaccacctctggtt
gatattctcaacaagggtatgagtacatcagaggaaacagctgcagctgcttctgtggca
ttcaagtatatatgtgaagactgtaggagaaagttctctggttcgttggatggccttttc
cagatttaccaaattgcattaagtggagttggtggttacaaagtttcttcagaggactca
ttgcatttggttgaagccttaagtgtggttatcacgactctcccaccagaccatgctcaa
agagcattggagttaatctgccaaccagtaattaatcccttgcaggaaataatccagcaa
ggagatacagtgcttcagcaagttcctgttcggcaattaaccttgcatatagaccgatta
tcatgcatttttagcaatgtgaaacttccacaagtagttgctgacgctgtcaatagatat
tggccaacattgaaaagtatttttgatcaacgggcatgggatacacggaccatggagtca
ctatgtcgttcttgcaaatttgctgtaaggacatgcgggaggttcatgggattcaccatt
ggtgcaatgcttgaagaaatccaaactctgtatcagcaacacaatcaggcttgcttcctt
tacttgtcgagtgaagttattaagatatttgggtccgatccagcatgtgcaaactatctt
gcaagtctgattcaggcactttttggccatacaatacagctccttcggactattcaggat
tttacagctagaccggatatagctgatgattgcttcctgctagcatcaagatgtattcgt
tactgtccagatttatttgtacctacagagatgtttccaagattggttgactgtgcaatg
gttggtataactatacagcacagggaggcatgcaagtctatattatcttttctatctgat
gtatttgatcttgcaaaatcacctgagggggaaaagtaccgagaattaataaatacagtt
atacttcagcggggtgcagtacttactagaataatggttgcttccttaacaggagctctg
ccatctagtcgcttggaagaggtctcgtatgttctggtgtcccttagcagatcatttggt
gggaacatgttgagttgggcaagggaatgtattacccttataccaccacaagccttgaca
gattcagaacgttcaagattcttgaatattatatctgatgcatcatcaggatctagtctt
ggttccataacagatagatttgcagaaatctcagaagtttgtagaaggaacaaaactgtg
caagacatagttcaaggtgctttgcggccacatgatttatccttcacggttgcccccccg
ccattgtga

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