Oryza sativa japonica (Japanese rice): 9271327
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Entry
9271327 CDS
T01015
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1
KO
K08517
vesicle transport protein SEC22
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
osa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9271327
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
9271327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
9271327
Membrane trafficking [BR:
osa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
9271327
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
9271327
NCBI-ProteinID:
XP_015644474
UniProt:
B9FRZ8
LinkDB
All DBs
Position
6:complement(join(5179399..5179482,5180093..5180169,5180458..5180604,5180693..5180853,5181477..5181664))
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AA seq
218 aa
AA seq
DB search
MVKLTMIARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
YFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLRNEFERVNGSQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRI
YADKAKDLNRQALIRKYAPVAIVIGVVLMLFWLKNKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgatagcacgtgttactgatggccttccactggcagaagggttg
gatgatggacgggatcagaaggacgctgacttttacaagcagcaagctaaacttctattc
aaaaacttatcaaaggggcaacatgaagcctcgcggatgtcaattgagactgggccatac
tattttcattacatcattgaggggcgagtatgctatctgactatgtgtgaccgttcttat
ccaaagaaactcgcattccagtacctagaagatctgagaaatgaattcgaaagagtcaac
ggcagtcaaatcgaaacagctgcaaggccgtatgcgtttattaagtttgacacattcatt
cagaagactaagaaactctatttggatactagaacccagaggaatcttgcgaaattaaat
gatgagctctatgaggtgcatcaaattatgactcgtaatgttcaagaagttcttggtgtc
ggtgaaaagctagaccaggtcactgaaatgtcaactaggctgacttctgacacaagaatc
tatgcagataaggctaaggatctcaatcgccaggccttgattcggaagtatgcccctgtt
gccattgtgatcggtgtagttttgatgctcttttggttgaagaacaagatatggtaa
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