Oryza sativa japonica (Japanese rice): 9271471
Help
Entry
9271471 CDS
T01015
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
9271471
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
9271471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
9271471
NCBI-ProteinID:
XP_025881073
LinkDB
All DBs
Position
5:complement(join(18795504..18795859,18795969..18796605))
Genome browser
AA seq
330 aa
AA seq
DB search
MVLVAPAASYHHHRAAAAAAAAAAAAAAAEPVFPLLGTGQCALDADTAKSSGAAAAAGVP
PGSASAIHFWQSQPTTAAGAGGGSADKKPLPMLDYGGIGGPGGSGAATCHDCGNQAKKDC
VHHRCRTCCKSRGFDCPTHVRSTWVPAARRRERQQLAGAASSPPTSSAFPAATTASAKKP
RLLGSQTTTTTSRTSTSNATTPRSFDTSSSHQVASFRDALPRHVRAPAVFRCVRVTSVDD
GDDEFAYQAAVTINGHMFRGFLYDQGADDGRGGMASTSNDESSHGAGAAVPSISDLHLGS
ASAAVPPHLYSGGSGGPLILGGLGYGNTMN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgtcgcccccgccgcgtcgtatcatcaccacagagccgccgccgccgcggcg
gcggcggcggctgcggcggccgcggcagagcccgtgttcccgctgctcgggacggggcag
tgcgcgctcgacgctgacactgccaagtcgtcgggcgctgccgcggcggcgggggtgccg
cccgggagcgccagcgccatccacttctggcagtcgcagccgacgacggccgccggagct
ggtggtggctccgccgacaagaagccgctccccatgctggactacggcggcatcggcggc
ccgggaggctccggcgcggccacgtgccacgactgcggcaaccaggcgaagaaggactgc
gtccaccaccggtgccggacgtgctgcaagagccgcggcttcgactgccccacccacgtc
aggagcacctgggtccccgccgcgcgccgccgcgagcgccagcagctcgccggcgccgcc
tcctcccctcccacttcctccgccttccccgccgcgaccaccgcctcggccaagaagcca
cgcctcctcggctcccagaccaccaccaccacctcccgcacctccacctccaacgccacc
actcctcgcagcttcgacacctcctccagccaccaagtcgcgtcgttcagggacgccctg
ccgcgccacgtgcgcgcgccggcggtgttccggtgcgtgcgggtgacgtccgtggacgac
ggcgacgacgagttcgcgtaccaggcggcggtgaccatcaacggccacatgttcaggggg
ttcctgtacgaccagggcgccgacgacggccgcggcggcatggcatccaccagcaacgac
gagtccagccacggcgccggcgccgccgtgcccagcatctccgacctgcacctcggcagc
gcctcggcggcggtgccaccgcacctgtacagcggcggcagcggcgggccgctgatcctc
ggcgggttgggctacggcaacaccatgaactga
DBGET
integrated database retrieval system
